Salmonella enterica subsp. enterica serovar Muenchen FSIS1606504 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Muenchen FSIS1606504 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,836,400 bp | CP082506 |
| plasmid pF18S006-1: | 108,501 bp | CP082507 |
REBASE acronym: Sen6504
Org_num: 55290
All begin A7Q27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19440 | 322 aa hypothetical protein | |||
| 19445 | R | Ssp6947IP (100% identity) | GAGNNNNNNNRTCC | Sen6504ORF19450P |
| 19450 | M | M.Ssp6947I (100% identity) | GAGNNNNNNNRTCC | M.Sen6504ORF19450P |
| 19455 | S | S.SensIBG7b4ORF19375P (100% identity) | GAGNNNNNNNRTCC | S.Sen6504ORF19450P |
| 19460 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.Sen6504DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen6504ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 19580 | YebC/PmpR family DNA-binding transcriptional | |||
| 19585 | R | Ssp6947ORF4170P (100% identity) | Sen6504ORF19585P | |
| 19590 | 239 aa hypothetical protein | |||
| 19590 | 239 aa hypothetical protein | |||
| 19595 | R | Spy5740IVP (100% identity) | GGTACC | Sen6504ORF19600P |
| 19600 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen6504ORF19600P |
| 19605 | 202 aa hypothetical protein | |||
| 21110 | LexA family transcriptional regulator | |||
| 21115 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen6504ORF21115P |
| 21120 | helix-turn-helix domain-containing protein | |||
| 22230 | ogr/Delta-like zinc finger family protein | |||
| 22235 | M | M.SenST203ORF20920P (100% identity) | M.Sen6504ORF22235P | |
| 22240 | 66 aa hypothetical protein | |||
| 22245 | replication endonuclease | |||
| 22250 | M | M.SenST203ORF20905P (100% identity) | M1.Sen6504ORF22250P | |
| 22255 | 75 aa hypothetical protein | |||
| 22260 | M | M.SenST203ORF20895P (100% identity) | GATC | M2.Sen6504ORF22250P |
| 22265 | 127 aa hypothetical protein | |||
| 22440 | replication endonuclease | |||
| 22445 | M | M1.SenS1655ORF23660P (100% identity) | M.Sen6504ORF22445P | |
| 22450 | 65 aa hypothetical protein | |||
| 22450 | 65 aa hypothetical protein | |||
| 22455 | M | M.SenS1655ORF23670P (100% identity) | GATC | M.Sen6504ORF22455P |
| 22460 | 70 aa hypothetical protein | |||
| plasmid pF18S006-1 | ||||
| 23975 | 73 aa hypothetical protein | |||
| 23980 | M | M.StyR64ORFAP (100% identity) | M.Sen6504ORF23980P | |
| 23985 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17230 | small effector SsaA | |||
| 17235 | R | SensIBG7b4ORF17175P (100% identity) | CAGAG | Sen6504ORF17240P |
| 17240 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen6504ORF17240P |
| 17245 | MFS transporter | |||