Salmonella enterica subsp. enterica serovar Typhimurium CVM N17S520 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM N17S520 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33765
| Sequence length: | GenBank #: | |
| Chromosome: | 4,992,328 bp | CP082704 |
| plasmid pN17S520: | 100,508 bp | CP082705 |
REBASE acronym: Sen17S2
Org_num: 55327
All begin KZZ31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20800 | restriction endonuclease | |||
| 20805 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen17S2ORF20810P |
| 20810 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen17S2ORF20810P |
| 20815 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen17S2ORF20810P |
| 20820 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1830 | cell division protein DamX | |||
| 1835 | M | M.StyTDamP (100% identity) | GATC | M.Sen17S2DamP |
| 1840 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen17S2ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 9450 | phosphohydrolase | |||
| 9455 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen17S2DcmP |
| 9460 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen17S2DcmP |
| 9465 | drug/metabolite exporter YedA | |||
| 18575 | 143 aa hypothetical protein | |||
| 18580 | M | M.Vch11614ORFCP (100% identity) | M.Sen17S2ORF18580P | |
| 18585 | 120 aa hypothetical protein | |||
| 20960 | BREX system P-loop protein BrxC | |||
| 20965 | RM | StyUK1IV (100% identity) | GATCAG | Sen17S2ORF20965P |
| 20970 | AAA family ATPase | |||
| plasmid pN17S520 | ||||
| 24420 | 73 aa hypothetical protein | |||
| 24425 | M | M.StyR64ORFAP (100% identity) | M.Sen17S2ORF24425P | |
| 24430 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17630 | small effector SsaA | |||
| 17635 | R | StyUK1IP (99% identity) | CAGAG | Sen17S2ORF17640P |
| 17640 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen17S2ORF17640P |
| 17645 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20795 | BrnT family toxin | |||
| 20800 | R | StyUK1MrrP (100% identity) | Sen17S2MrrP | |
| 20805 | type I restriction-modification system | |||