Salmonella enterica subsp. enterica serovar Litchfield CVM N17S922 |
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Putative Salmonella enterica subsp. enterica serovar Litchfield CVM N17S922 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,675,372 bp | CP082600 |
| plasmid pN17S922: | 100,987 bp | CP082601 |
REBASE acronym: SenS922
Org_num: 55280
All begin KZZ33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19105 | 322 aa hypothetical protein | |||
| 19110 | R | Sen60809ORF18260P (100% identity) | GTANNNNNNNNGTTC | SenS922ORF19115P |
| 19115 | M | M.SenWT8I (100% identity) | GTANNNNNNNNGTTC | M.SenS922ORF19115P |
| 19120 | S | S.Sens661ORF19445P (100% identity) | GTANNNNNNNNGTTC | S.SenS922ORF19115P |
| 19125 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1770 | cell division protein DamX | |||
| 1775 | M | M.Sen60808DamP (100% identity) | GATC | M.SenS922DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2260 | DUF2556 family protein | |||
| 2265 | M | M.SenC6017ORF560P (100% identity) | ATGCAT | M.SenS922ORF2265P |
| 2270 | DNA-binding transcriptional regulator Fis | |||
| 8760 | phosphohydrolase | |||
| 8765 | M | M.Sens8813DcmP (100% identity) | CCWGG | M.SenS922DcmP |
| 8770 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS922DcmP |
| 8775 | drug/metabolite exporter YedA | |||
| 19290 | phage polarity suppression protein | |||
| 19295 | R | SenE40ORF20490P (100% identity) | CAGCTG | SenS922ORF19305P |
| 19300 | C | C.SptAI (100% identity) | C.SenS922ORF19305P | |
| 19305 | M | M.SptAI (100% identity) | CAGCTG | M.SenS922ORF19305P |
| 19310 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pN17S922 | ||||
| 22775 | 73 aa hypothetical protein | |||
| 22780 | M | M.SspPIBORF23080P (100% identity) | M.SenS922ORF22780P | |
| 22785 | 104 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16855 | small effector SsaA | |||
| 16860 | R | Sen60808ORF16960P (100% identity) | CAGAG | SenS922ORF16865P |
| 16865 | M | M.Sen60808ORF16960P (100% identity) | CAGAG | M.SenS922ORF16865P |
| 16870 | MFS transporter | |||