Streptococcus suis Transconjugant cAKJ18 |
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Putative Streptococcus suis Transconjugant cAKJ18 RM systems
Ref: Huang,J. and Wang,L. unpublished
REBASE ref # 31555
Complete sequence: 2,063,473 bp
GenBank #: CP082201
REBASE acronym: SsucAKJ18
Org_num: 55852
All begin K6967_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3635 | FAD-containing oxidoreductase | |||
| 3640 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | SsucAKJ18ORF3645P |
| 3645 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.SsucAKJ18ORF3645P |
| 3650 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsucAKJ18ORF3645P |
| 3655 | 243 aa hypothetical protein | |||
| 6655 | ribose-5-phosphate isomerase RpiA | |||
| 6660 | S | S2.SsucSS389ORF6590P (100% identity) | S2.SsucAKJ18ORF6670P | |
| 6665 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.SsucAKJ18ORF6670P |
| 6670 | M | M.SsuiS10ORFBP (100% identity) | M.SsucAKJ18ORF6670P | |
| 6675 | R | SsuiS10ORFBP (100% identity) | SsucAKJ18ORF6670P | |
| 6680 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2960 | XRE family transcriptional regulator | |||
| 2965 | C | C.SsuD12ORF1197P (100% identity) | C.SsucAKJ18ORF2970P | |
| 2970 | M | M1.SsuAKJ18ORF4910P (100% identity) | M1.SsucAKJ18ORF2970P | |
| 2975 | M | M2.SsuAKJ18ORF4910P (100% identity) | M2.SsucAKJ18ORF2970P | |
| 2980 | R | R1.SsuAKJ18ORF4910P (100% identity) | R1.SsucAKJ18ORF2970P | |
| 2985 | R | R2.SsuAKJ18ORF4910P (100% identity) | R2.SsucAKJ18ORF2970P | |
| 2990 | 393 aa hypothetical protein | |||
| 3070 | helix-turn-helix domain-containing protein | |||
| 3075 | M | M2.SsuS40ORF7030P (100% identity) | M1.SsucAKJ18ORF3075P | |
| 3080 | HNH endonuclease | |||
| 3085 | M | M2.SsuAKJ18ORF5010P (100% identity) | M2.SsucAKJ18ORF3075P | |
| 3090 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3580 | 109 aa hypothetical protein | |||
| ??? | M | M.SsuiS10ORFEP (100% identity) | M.SsucAKJ18ORF3585P | |
| 3595 | R | SsuiS10ORFEP (100% identity) | SsucAKJ18ORF3585P | |
| 3600 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4370 | 262 aa hypothetical protein | |||
| 4375 | R | SsuiS10McrBP (100% identity) | SsucAKJ18McrBP | |
| 4380 | R | SsucSS389McrCP (100% identity) | SsucAKJ18McrCP | |
| 4385 | site-specific integrase | |||