Streptococcus suis Transconjugant cDY107 |
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Putative Streptococcus suis Transconjugant cDY107 RM systems
Ref: Huang,J. and Wang,L. unpublished
REBASE ref # 31555
Complete sequence: 2,062,921 bp
GenBank #: CP082200
REBASE acronym: SsucDY107
Org_num: 55853
All begin K6971_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3630 | FAD-containing oxidoreductase | |||
| 3635 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | SsucDY107ORF3640P |
| 3640 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.SsucDY107ORF3640P |
| 3645 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsucDY107ORF3640P |
| 3650 | 243 aa hypothetical protein | |||
| 6655 | ribose-5-phosphate isomerase RpiA | |||
| 6660 | S | S2.SsucSS389ORF6590P (100% identity) | S2.SsucDY107ORF6670P | |
| 6665 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.SsucDY107ORF6670P |
| 6670 | M | M.SsuiS10ORFBP (100% identity) | M.SsucDY107ORF6670P | |
| 6675 | R | SsuiS10ORFBP (100% identity) | SsucDY107ORF6670P | |
| 6680 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1430 | helix-turn-helix domain-containing protein | |||
| 1435 | M | M.SsucFJSM5ORF3040AP (100% identity) | M.SsucDY107ORF1435AP | |
| 1440 | 248 aa hypothetical protein | |||
| 1445 | M | M.Sdy107ORF3460BP (100% identity) | M.SsucDY107ORF1435BP | |
| 1450 | DNA (cytosine-5-)-methyltransferase | |||
| 1445 | DNA modification methylase | |||
| 1450 | M | M.Sdy107ORF3475P (100% identity) | M.SsucDY107ORF1450P | |
| 1455 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3575 | 85 aa hypothetical protein | |||
| ??? | M | M.SsuiS10ORFEP (100% identity) | M.SsucDY107ORF3580P | |
| 3590 | R | SsuiS10ORFEP (100% identity) | SsucDY107ORF3580P | |
| 3595 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4365 | 262 aa hypothetical protein | |||
| 4370 | R | SsuiS10McrBP (100% identity) | SsucDY107McrBP | |
| 4375 | R | SsucSS389McrCP (100% identity) | SsucDY107McrCP | |
| 4380 | site-specific integrase | |||