Streptococcus suis FJSM5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus suis FJSM5 RM systems
Ref: Huang,J. and Wang,L. unpublished
REBASE ref # 31555
Complete sequence: 2,626,999 bp
GenBank #: CP082204
REBASE acronym: SsuFJSM5
Org_num: 55838
All begin K6974_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1605 | bifunctional acetaldehyde-CoA/alcohol | |||
| 1610 | M | M.SsuC2ORF1555P (97% identity) | M.SsuFJSM5ORF1610P | |
| 1615 | virulence RhuM family protein | |||
| 1620 | S | S.Sdy20AORF6770P (67% identity) | S.SsuFJSM5ORF1610P | |
| 1625 | anticodon nuclease | |||
| 1630 | R | SsuMA4ORFEP (98% identity) | SsuFJSM5ORF1610P | |
| 1635 | threonine synthase | |||
| 10330 | serine--tRNA ligase | |||
| 10335 | M | M.SsuAKJ18ORF2360P (99% identity) | M.SsuFJSM5ORF10335P | |
| 10340 | S | S3.SsuMA4ORFJP (39% identity) | S1.SsuFJSM5ORF10335P | |
| 10345 | S | S2.SsuMA4ORFJP (100% identity) | S2.SsuFJSM5ORF10335P | |
| 10350 | S | S3.Ssu28302ORF522P (68% identity) | S3.SsuFJSM5ORF10335P | |
| 10355 | R | Ssu130302ORF10410P (99% identity) | SsuFJSM5ORF10335P | |
| 10360 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | bifunctional | |||
| 255 | R | Ssp29887ORF240P (99% identity) | SsuFJSM5ORF255P | |
| 260 | DpnD/PcfM family protein | |||
| 4255 | ABC transporter ATP-binding protein | |||
| 4260 | M | M.Ssp29887ORF8000P (95% identity) | M.SsuFJSM5ORF4260P | |
| 4265 | HaeIII family restriction endonuclease | |||
| 5700 | helix-turn-helix domain-containing protein | |||
| 5705 | M | M.SsucFJSM5ORF3040AP (100% identity) | M.SsuFJSM5ORF5705AP | |
| 5710 | 248 aa hypothetical protein | |||
| 5715 | M | M.SsucFJSM5ORF3040BP (100% identity) | M.SsuFJSM5ORF5705BP | |
| 5720 | DNA (cytosine-5-)-methyltransferase | |||
| 5715 | DNA modification methylase | |||
| 5720 | M | M.SsucFJSM5ORF3055P (100% identity) | M.SsuFJSM5ORF5720P | |
| 5725 | 82 aa hypothetical protein | |||
| 8085 | 142 aa hypothetical protein | |||
| 8090 | M | M.Sdy107ORF7430P (99% identity) | M.SsuFJSM5ORF8090P | |
| 8095 | replication initiator protein A | |||
| 9480 | MmcQ/YjbR family DNA-binding protein | |||
| 9485 | R | SsuC2ORF9615P (100% identity) | SsuFJSM5ORF9490P | |
| 9490 | M | M.SsuC2ORF9615P (100% identity) | M.SsuFJSM5ORF9490P | |
| 9495 | TIGR04141 family sporadically distributed | |||
| 11680 | ATP-binding protein | |||
| 11685 | M | M.SsuLSM178ORF9555P (98% identity) | GCCHR | M.SsuFJSM5ORF11685P |
| 11690 | 78 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9000 | 252 aa hypothetical protein | |||
| 9005 | R | SsuYS77IP (98% identity) | SsuFJSM5ORF9015P | |
| 9010 | SLATT domain-containing protein | |||
| 9015 | M | M.Spa286ORF12660P (77% identity) | M.SsuFJSM5ORF9015P | |
| 9020 | holin-like toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2475 | restriction endonuclease subunit S | |||
| 2480 | M | M.SsuYS77ORFKP (100% identity) | M.SsuFJSM5ORF2480P | |
| 2485 | DUF1492 domain-containing protein | |||
| 6855 | ArpU family transcriptional regulator | |||
| 6860 | M | M.SsuYS77ORFKP (100% identity) | M.SsuFJSM5ORF6860P | |
| 6865 | 72 aa hypothetical protein | |||