Streptococcus suis Transconjugant cSS389 |
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Putative Streptococcus suis Transconjugant cSS389 RM systems
Ref: Huang,J. and Wang,L. unpublished
REBASE ref # 31555
Complete sequence: 2,060,676 bp
GenBank #: CP082197
REBASE acronym: SsucSS389
Org_num: 55856
All begin K6975_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5270 | 190 aa hypothetical protein | |||
| 5275 | S | S.SsuSS389ORF6165P (100% identity) | CCAANNNNNNTTC | S.SsucSS389ORF5280P |
| 5280 | M | M.SsuSS389ORF6165P (100% identity) | CCAANNNNNNTTC | M.SsucSS389ORF5280P |
| 5285 | R | SsuSS389ORF6165P (100% identity) | CCAANNNNNNTTC | SsucSS389ORF5280P |
| 5290 | FAD-containing oxidoreductase | |||
| 6575 | ribose-5-phosphate isomerase RpiA | |||
| 6580 | S | S2.SsucNJ3ORF6685P (100% identity) | S2.SsucSS389ORF6590P | |
| 6585 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.SsucSS389ORF6590P |
| 6590 | M | M.SsuiS10ORFBP (100% identity) | M.SsucSS389ORF6590P | |
| 6595 | R | SsuiS10ORFBP (100% identity) | SsucSS389ORF6590P | |
| 6600 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5475 | 89 aa hypothetical protein | |||
| 5480 | M | M.SsuSS389ORF6365P (100% identity) | M.SsucSS389ORF5480P | |
| 5485 | helix-turn-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3280 | holin-like toxin | |||
| 3285 | M | M.SsuSS389ORF7285P (100% identity) | M.SsucSS389ORF3285P | |
| 3290 | 305 aa hypothetical protein | |||
| 3295 | R | SsuSS389ORF7285P (100% identity) | SsucSS389ORF3285P | |
| 3300 | 249 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4560 | site-specific integrase | |||
| 4565 | R | SsucNJ3McrCP (100% identity) | SsucSS389McrCP | |
| 4570 | R | SsuiS10McrBP (100% identity) | SsucSS389McrBP | |
| 4575 | 262 aa hypothetical protein | |||