Streptococcus suis Transconjugant cFJSM5 |
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Putative Streptococcus suis Transconjugant cFJSM5 RM systems
Ref: Huang,J. and Wang,L. unpublished
REBASE ref # 31555
Complete sequence: 2,061,041 bp
GenBank #: CP082199
REBASE acronym: SsucFJSM5
Org_num: 55854
All begin K6970_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3605 | FAD-containing oxidoreductase | |||
| 3610 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | SsucFJSM5ORF3615P |
| 3615 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.SsucFJSM5ORF3615P |
| 3620 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsucFJSM5ORF3615P |
| 3625 | 243 aa hypothetical protein | |||
| 6630 | ribose-5-phosphate isomerase RpiA | |||
| 6635 | S | S2.SsucSS389ORF6590P (100% identity) | S2.SsucFJSM5ORF6645P | |
| 6640 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.SsucFJSM5ORF6645P |
| 6645 | M | M.SsuiS10ORFBP (100% identity) | M.SsucFJSM5ORF6645P | |
| 6650 | R | SsuiS10ORFBP (100% identity) | SsucFJSM5ORF6645P | |
| 6655 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3035 | helix-turn-helix domain-containing protein | |||
| 3040 | M | M.SsucDY107ORF1435AP (100% identity) | M.SsucFJSM5ORF3040AP | |
| 3045 | 248 aa hypothetical protein | |||
| 3050 | M | M.SsuFJSM5ORF5705BP (100% identity) | M.SsucFJSM5ORF3040BP | |
| 3055 | DNA (cytosine-5-)-methyltransferase | |||
| 3050 | DNA modification methylase | |||
| 3055 | M | M1.SsuHB18ORFDP (100% identity) | M.SsucFJSM5ORF3055P | |
| 3060 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | 75 aa hypothetical protein | |||
| ??? | M | M.SsuiS10ORFEP (100% identity) | M.SsucFJSM5ORF3555P | |
| 3565 | R | SsuiS10ORFEP (100% identity) | SsucFJSM5ORF3555P | |
| 3570 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4340 | 262 aa hypothetical protein | |||
| 4345 | R | SsuiS10McrBP (100% identity) | SsucFJSM5McrBP | |
| 4350 | R | SsucSS389McrCP (100% identity) | SsucFJSM5McrCP | |
| 4355 | site-specific integrase | |||