Streptococcus suis Transconjugant cNJ3 |
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Putative Streptococcus suis Transconjugant cNJ3 RM systems
Ref: Huang,J. and Wang,L. unpublished
REBASE ref # 31555
Complete sequence: 2,065,481 bp
GenBank #: CP082198
REBASE acronym: SsucNJ3
Org_num: 55855
All begin K6968_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3650 | FAD-containing oxidoreductase | |||
| 3655 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | SsucNJ3ORF3660P |
| 3660 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.SsucNJ3ORF3660P |
| 3665 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsucNJ3ORF3660P |
| 3670 | 243 aa hypothetical protein | |||
| 6670 | ribose-5-phosphate isomerase RpiA | |||
| 6675 | S | S2.SsucSS389ORF6590P (100% identity) | S2.SsucNJ3ORF6685P | |
| 6680 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.SsucNJ3ORF6685P |
| 6685 | M | M.SsuiS10ORFBP (100% identity) | M.SsucNJ3ORF6685P | |
| 6690 | R | SsuiS10ORFBP (100% identity) | SsucNJ3ORF6685P | |
| 6695 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3075 | helix-turn-helix domain-containing protein | |||
| 3080 | M | M.SsuNJ3ORF6065P (100% identity) | M.SsucNJ3ORF3080P | |
| 3085 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3595 | 109 aa hypothetical protein | |||
| ??? | M | M.SsuiS10ORFEP (100% identity) | M.SsucNJ3ORF3600P | |
| 3610 | R | SsuiS10ORFEP (100% identity) | SsucNJ3ORF3600P | |
| 3615 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4385 | 262 aa hypothetical protein | |||
| 4390 | R | SsuiS10McrBP (100% identity) | SsucNJ3McrBP | |
| 4395 | R | SsucSS389McrCP (100% identity) | SsucNJ3McrCP | |
| 4400 | site-specific integrase | |||