Citrobacter farmeri CCRI-24236 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter farmeri CCRI-24236 RM systems
Ref: Abed,J.Y. et al. unpublished
REBASE ref # 33048
| Sequence length: | GenBank #: | |
| Chromosome: | 5,022,624 bp | CP081314 |
| plasmid pCCRI24236-1: | 198,299 bp | CP081315 |
| plasmid pCCRI24236-2: | 82,438 bp | CP081316 |
REBASE acronym: Cfa24236
Org_num: 52677
All begin Cf24236_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2808 | DUF45 domain-containing protein | |||
| 2809 | R | Cfr0102ORF5675P (97% identity) | GGCANNNNNNCCT | Cfa24236IP |
| 2810 | S | S.Csp570ORF10065P (96% identity) | GGCANNNNNNCCT | S.Cfa24236I |
| 2811 | M | M.Eco13C18ORF9060P (99% identity) | GGCANNNNNNCCT | M.Cfa24236I |
| 2812 | 38 aa hypothetical protein | |||
| plasmid pCCRI24236-2 | ||||
| 6099 | 136 aa hypothetical protein | |||
| 6001 | M | M.KpnN11aORF30P (100% identity) | GAGNNNNNNRTGA | M.Cfa24236II |
| 6002 | S | S.Kmi24235I (100% identity) | GAGNNNNNNRTGA | S.Cfa24236II |
| 6003 | R | Kmi24235IP (100% identity) | GAGNNNNNNRTGA | Cfa24236IIP |
| 6004 | 117 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 352 | cell division protein DamX | |||
| 353 | M | M.Cfa8141DamP (100% identity) | GATC | M.Cfa24236Dam |
| 354 | ribulose-phosphate 3-epimerase | |||
| 460 | DUF2556 family protein | |||
| 461 | M | M.Cfa8141ORF2345P (98% identity) | M.Cfa24236ORF461P | |
| 462 | site-specific integrase | |||
| 2859 | drug/metabolite exporter YedA | |||
| 2860 | V | V.Cfa8141DcmP (98% identity) | CCWGG | V.Cfa24236DcmP |
| 2861 | M | M.Cfa8141DcmP (97% identity) | CCWGG | M.Cfa24236Dcm |
| 2862 | phosphohydrolase | |||
| 3258 | ATP-binding protein | |||
| 3259 | M | M.Sne174ORF10435P (87% identity) | TACCGT | M.Cfa24236III |
| 3260 | TIGR02646 family protein | |||
| 4028 | DUF4280 domain-containing protein | |||
| 4029 | R | CfrNIH2ORF23600P (88% identity) | Cfa24236ORF4029P | |
| 4030 | helix-turn-helix domain-containing protein | |||
| plasmid pCCRI24236-1 | ||||
| 5254 | DNA polymerase III subunit beta | |||
| 5255 | M | M.Sen3039ORF24445P (100% identity) | M.Cfa24236ORF5255P | |
| 5256 | 76 aa hypothetical protein | |||