Salmonella enterica subsp. enterica serovar Typhi ISP2825 |
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Putative Salmonella enterica subsp. enterica serovar Typhi ISP2825 RM systems
Ref: Lee,G.Y. and Song,J. unpublished
REBASE ref # 32956
Complete sequence: 4,774,014 bp
GenBank #: CP080960
REBASE acronym: Sen2825
Org_num: 51624
All begin K3U68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23105 | endoribonuclease SymE | |||
| 23110 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen2825ORF23120P |
| 23115 | 46 aa hypothetical protein | |||
| 23120 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.Sen2825ORF23120P |
| 23125 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen2825ORF23120P |
| 23130 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4440 | phosphohydrolase | |||
| 4445 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen2825DcmP |
| 4450 | V | V.StyTDcmP (100% identity) | V.Sen2825DcmP | |
| 4455 | drug/metabolite exporter YedA | |||
| 9650 | DUF550 domain-containing protein | |||
| 9655 | M | M.StyTORF1914P (100% identity) | M.Sen2825ORF9655P | |
| 9660 | ead/Ea22-like family protein | |||
| 9715 | DGQHR domain-containing protein | |||
| ??? | M | M.SenCEPR1ORF14095P (100% identity) | M.Sen2825ORF9720P | |
| 9725 | DUF4060 family protein | |||
| 16635 | DNA-binding transcriptional regulator Fis | |||
| 16640 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2825ORF16640P |
| 16645 | DUF2556 family protein | |||
| 19590 | cell division protein DamX | |||
| 19595 | M | M.StyTDamP (100% identity) | GATC | M.Sen2825DamP |
| 19600 | ribulose-phosphate 3-epimerase | |||
| 20240 | replication endonuclease | |||
| 20245 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen2825ORF20245P |
| 20250 | TraR/DksA family transcriptional regulator | |||
| 21890 | replication endonuclease | |||
| 21895 | M | M.StyTORF4329P (100% identity) | M.Sen2825ORF21895P | |
| 21900 | 3-5 exonuclease | |||
| 22980 | 79 aa hypothetical protein | |||
| 22985 | R | Senst12ORF9665P (100% identity) | Sen2825ORF22985P | |
| 22990 | YebC/PmpR family DNA-binding transcriptional | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12620 | small effector SsaA | |||
| 12625 | R | StyTORF2507P (99% identity) | CAGAG | Sen2825ORF12630P |
| 12630 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen2825ORF12630P |
| 12635 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23125 | type I restriction-modification system | |||
| 23130 | R | StyTMrrP (100% identity) | Sen2825MrrP | |
| 23135 | BrnT family toxin | |||