Escherichia coli PK8566 |
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Putative Escherichia coli PK8566 RM systems
Ref: Mohsin,M. et al. unpublished
REBASE ref # 31850
| Sequence length: | GenBank #: | |
| Chromosome: | 4,859,576 bp | CP080172 |
| plasmid pPK8566-117kb: | 117,749 bp | CP080174 |
| plasmid pPK8566-169kb: | 169,561 bp | CP080173 |
| plasmid pPK8566-tetX: | 111,556 bp | CP080175 |
REBASE acronym: EcoPK8566
Org_num: 50721
All begin KZY09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | 61 aa hypothetical protein | |||
| 2275 | S | S.Ecostr10ORF18570P (100% identity) | S.EcoPK8566ORF2280P | |
| 2280 | M | M.Ecostr10ORF18570P (100% identity) | M.EcoPK8566ORF2280P | |
| 2285 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 925 | PerC family transcriptional regulator | |||
| 930 | M | M.Sso90ORF15820P (99% identity) | GATC | M.EcoPK8566ORF930P |
| 935 | LexA family transcriptional regulator | |||
| 2335 | 183 aa hypothetical protein | |||
| 2340 | R | EcoLWY6ORF19850P (100% identity) | EcoPK8566ORF2340P | |
| 2345 | HNH endonuclease | |||
| 12695 | drug/metabolite exporter YedA | |||
| 12700 | V | V.EcosEC7DcmP (100% identity) | V.EcoPK8566DcmP | |
| 12705 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoPK8566DcmP |
| 12710 | phosphohydrolase | |||
| 17915 | H-NS histone family protein | |||
| 17920 | M | M.SenS530DndBP (100% identity) | M.EcoPK8566DndBP | |
| 17925 | DNA phosphorothioation system sulfurtransferase | |||
| 17920 | DNA sulfur modification protein DndB | |||
| 17925 | M | M.SenS530DndCP (100% identity) | M.EcoPK8566DndCP | |
| 17930 | DNA sulfur modification protein DndD | |||
| 17925 | DNA phosphorothioation system sulfurtransferase | |||
| 17930 | M | M.SenS530DndDP (100% identity) | M.EcoPK8566DndDP | |
| 17935 | DNA sulfur modification protein DndE | |||
| 17930 | DNA sulfur modification protein DndD | |||
| 17935 | M | M.SenS530DndEP (100% identity) | M.EcoPK8566DndEP | |
| 17940 | ATP-binding protein | |||
| 17945 | DUF262 domain-containing protein | |||
| 17950 | R | SenS530DptHP (100% identity) | EcoPK8566DptHP | |
| 17955 | DNA phosphorothioation-dependent restriction | |||
| 17950 | DNA phosphorothioation-dependent restriction | |||
| 17955 | R | SenI222DptGP (100% identity) | EcoPK8566DptGP | |
| 17960 | DNA phosphorothioation-dependent restriction | |||
| 17955 | DNA phosphorothioation-dependent restriction | |||
| 17960 | R | SenS530DptFP (99% identity) | EcoPK8566DptFP | |
| 17965 | superoxide dismutase family protein | |||
| 18280 | RM | Eco21CCORF7720P (100% identity) | EcoPK8566ORF18280P | |
| 18285 | DEAD/DEAH box helicase | |||
| 19945 | DNA-binding transcriptional regulator Fis | |||
| 19950 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.EcoPK8566ORF19950P |
| 19955 | DUF2556 family protein | |||
| 20500 | ribulose-phosphate 3-epimerase | |||
| 20505 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPK8566DamP |
| 20510 | cell division protein DamX | |||
| plasmid pPK8566-117kb | ||||
| 24675 | 103 aa hypothetical protein | |||
| 24680 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoPK8566ORF24680P |
| 24685 | 73 aa hypothetical protein | |||
| plasmid pPK8566-169kb | ||||
| 24225 | 73 aa hypothetical protein | |||
| 24230 | M | M.SflN92ORF24820P (100% identity) | M.EcoPK8566ORF24230P | |
| 24235 | 101 aa hypothetical protein | |||
| plasmid pPK8566-tetX | ||||
| 25080 | 73 aa hypothetical protein | |||
| 25085 | M | M.SenST46ORF25580P (100% identity) | M.EcoPK8566ORF25085P | |
| 25090 | 102 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPK8566-tetX | ||||
| 25170 | tRNA modification GTPase | |||
| 25175 | R | SspS13ORF650P (100% identity) | EcoPK8566ORF25180P | |
| 25180 | M | M.SspS13ORF650P (100% identity) | M.EcoPK8566ORF25180P | |
| 25185 | 67 aa hypothetical protein | |||