Escherichia coli PK8277 |
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Putative Escherichia coli PK8277 RM systems
Ref: Mohsin,M. et al. unpublished
REBASE ref # 31850
| Sequence length: | GenBank #: | |
| Chromosome: | 4,621,390 bp | CP080133 |
| plasmid pPK8277-98kb: | 98,016 bp | CP080135 |
| plasmid pPK8277-tetX: | 101,760 bp | CP080134 |
REBASE acronym: EcoPK8277
Org_num: 50720
All begin KZY04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4060 | transposase | |||
| 4065 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoPK8277ORF4070P |
| 4070 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoPK8277ORF4070P |
| 4075 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoPK8277ORF4070P |
| 4080 | AAA family ATPase | |||
| 9150 | 388 aa hypothetical protein | |||
| 9155 | M | M.CfrC16ORF13960P (99% identity) | M.EcoPK8277ORF9155P | |
| 9160 | S | S.LamA167ORF12730P (58% identity) | S.EcoPK8277ORF9155P | |
| 9165 | R | Eko52260ORF29530P (98% identity) | EcoPK8277ORF9155P | |
| 9170 | M48 family metallopeptidase | |||
| plasmid pPK8277-98kb | ||||
| 23010 | type II toxin-antitoxin system Phd/YefM family | |||
| 23015 | M | M.EcoPSS10ORF26960P (100% identity) | M.EcoPK8277ORF23015P | |
| 23020 | S | S.EcoCR1ORF299P (100% identity) | S.EcoPK8277ORF23015P | |
| 23025 | R | EcoM9812ORF50560P (100% identity) | EcoPK8277ORF23015P | |
| 23030 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | cell division protein DamX | |||
| 1655 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPK8277DamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoPK8277ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 8840 | HD domain-containing protein | |||
| 8845 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoPK8277DcmP |
| 8850 | V | V.SflSTLE3DcmP (100% identity) | V.EcoPK8277DcmP | |
| 8855 | drug/metabolite exporter YedA | |||
| 15135 | NinE family protein | |||
| 15140 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoPK8277ORF15140P |
| 15145 | recombination protein NinB | |||
| plasmid pPK8277-98kb | ||||
| 23140 | IS4-like element IS421 family transposase | |||
| 23145 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoPK8277ORF23145P |
| 23150 | XRE family transcriptional regulator | |||
| plasmid pPK8277-tetX | ||||
| 22570 | 102 aa hypothetical protein | |||
| 22575 | M | M.SenST46ORF25580P (100% identity) | M.EcoPK8277ORF22575P | |
| 22580 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPK8277-tetX | ||||
| 22475 | 67 aa hypothetical protein | |||
| 22480 | M | M.SspS13ORF650P (100% identity) | M.EcoPK8277ORF22480P | |
| 22485 | R | SspS13ORF650P (100% identity) | EcoPK8277ORF22480P | |
| 22490 | tRNA modification GTPase | |||