Escherichia coli M24 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli M24 RM systems
Ref: Palkovicova,J. et al. unpublished
REBASE ref # 32716
Complete sequence: 5,271,974 bp
GenBank #: CP080120
REBASE acronym: EcoM24
Org_num: 50687
All begin KZX72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19905 | GTPase family protein | |||
| 19910 | M | M.EcoM70ORF22640P (100% identity) | M.EcoM24ORF19910P | |
| 19915 | S | S.EcoBone1BORF4235P (100% identity) | S.EcoM24ORF19910P | |
| 19920 | AAA family ATPase | |||
| 19925 | R | EcoM70ORF22640P (100% identity) | EcoM24ORF19910P | |
| 19930 | IS21-like element ISEc12 family helper ATPase | |||
| 21955 | restriction endonuclease | |||
| 21960 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoM24ORF21960P |
| 21965 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoM24ORF21960P |
| 21970 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoM24ORF21960P |
| 21975 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 680 | BREX-1 system phosphatase PglZ type A | |||
| 685 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoM24ORF685P |
| 690 | BREX system P-loop protein BrxC | |||
| 2200 | cell division protein DamX | |||
| 2205 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoM24DamP |
| 2210 | ribulose-phosphate 3-epimerase | |||
| 2800 | DUF2556 family protein | |||
| 2805 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoM24ORF2805P |
| 2810 | DNA-binding transcriptional regulator Fis | |||
| 10580 | phosphohydrolase | |||
| 10585 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoM24DcmP |
| 10590 | V | V.SflC32DcmP (74% identity) | V.EcoM24DcmP | |
| 10595 | drug/metabolite exporter YedA | |||
| 14100 | DUF3927 family protein | |||
| 14115 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoM24ORF14115P |
| 14120 | TrmB family transcriptional regulator | |||
| 16350 | helix-turn-helix domain-containing protein | |||
| 16355 | M | M.KpnYN1ORFGP (89% identity) | M.EcoM24ORF16355P | |
| 16360 | 72 aa hypothetical protein | |||
| 22295 | McrC family protein | |||
| 22300 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoM24ORF22305P |
| 22305 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoM24ORF22305P |
| 22310 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoM24ORF22305P |
| 22315 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22285 | glycosyltransferase | |||
| 22290 | R | EcosS3McrBP (100% identity) | EcoM24McrBP | |
| 22295 | R | EcosS9McrCP (100% identity) | EcoM24McrCP | |
| 22300 | Alw26I/Eco31I/Esp3I family type II restriction | |||