Escherichia coli Dog168 |
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Putative Escherichia coli Dog168 RM systems
Ref: Palkovicova,J. et al. unpublished
REBASE ref # 32716
Complete sequence: 5,112,272 bp
GenBank #: CP080116
REBASE acronym: EcoDog168
Org_num: 50649
All begin KZX73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5860 | type IV toxin-antitoxin system AbiEi family | |||
| 5865 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoDog168ORF5870P |
| 5870 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoDog168ORF5870P |
| 5875 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoDog168ORF5870P |
| 5880 | ash family protein | |||
| 7680 | restriction endonuclease | |||
| 7685 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoDog168ORF7685P |
| 7690 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoDog168ORF7685P |
| 7695 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoDog168ORF7685P |
| 7700 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 115 | DUF3927 family protein | |||
| 130 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoDog168ORF130P |
| 135 | TrmB family transcriptional regulator | |||
| 2375 | helix-turn-helix domain-containing protein | |||
| 2380 | M | M.KpnYN1ORFGP (89% identity) | M.EcoDog168ORF2380P | |
| 2385 | 72 aa hypothetical protein | |||
| 8020 | McrC family protein | |||
| 8025 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoDog168ORF8030P |
| 8030 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoDog168ORF8030P |
| 8035 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoDog168ORF8030P |
| 8040 | helix-turn-helix domain-containing protein | |||
| 12015 | BREX-1 system phosphatase PglZ type A | |||
| 12020 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoDog168ORF12020P |
| 12025 | BREX system P-loop protein BrxC | |||
| 13535 | cell division protein DamX | |||
| 13540 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDog168DamP |
| 13545 | ribulose-phosphate 3-epimerase | |||
| 14135 | DUF2556 family protein | |||
| 14140 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoDog168ORF14140P |
| 14145 | DNA-binding transcriptional regulator Fis | |||
| 21485 | phosphohydrolase | |||
| 21490 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoDog168DcmP |
| 21495 | V | V.SflC32DcmP (74% identity) | V.EcoDog168DcmP | |
| 21500 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8010 | glycosyltransferase | |||
| 8015 | R | EcosS3McrBP (100% identity) | EcoDog168McrBP | |
| 8020 | R | EcosS9McrCP (100% identity) | EcoDog168McrCP | |
| 8025 | Alw26I/Eco31I/Esp3I family type II restriction | |||