Shewanella algae CCU4054 |
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Putative Shewanella algae CCU4054 RM systems
Ref: Huang,Y.-T. unpublished
REBASE ref # 30419
| Sequence length: | GenBank #: | |
| Chromosome: | 4,787,071 bp | CP078519 |
| plasmid pCCU4054_01: | 132,646 bp | CP078520 |
REBASE acronym: Sal4054
Org_num: 51659
All begin KE624_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17515 | WYL domain-containing protein | |||
| 17520 | M | M.Sal4053ORF2970P (100% identity) | M.Sal4054ORF17520P | |
| 17525 | S | S.Sal4053ORF2970P (100% identity) | S.Sal4054ORF17520P | |
| 17530 | 110 aa hypothetical protein | |||
| 17535 | R | Sal4053ORF2970P (100% identity) | Sal4054ORF17520P | |
| 17540 | DUF4917 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5095 | SWIM zinc finger domain-containing protein | |||
| 5100 | V | V.Sal4053ORF15300P (100% identity) | V.Sal4054ORF5140P | |
| 5105 | IS5 family transposase | |||
| 5110 | IS256 family transposase | |||
| 5115 | 399 aa hypothetical protein | |||
| 5120 | 68 aa hypothetical protein | |||
| 5125 | histidine kinase | |||
| 5130 | IS5 family transposase | |||
| 5135 | ATP-binding protein | |||
| 5140 | M | M.SalHIDEORF20240P (100% identity) | M.Sal4054ORF5140P | |
| 5145 | aminoglycoside phosphotransferase family | |||
| 8570 | AAA family ATPase | |||
| 8575 | M | M.Spu10738III (100% identity) | GATC | M.Sal4054DamP |
| 8580 | DUF2970 domain-containing protein | |||
| 21560 | DUF3319 domain-containing protein | |||
| ??? | M | M.Sal4053ORF20525P (100% identity) | M.Sal4054ORF21565P | |
| 21575 | 208 aa hypothetical protein | |||
| plasmid pCCU4054_01 | ||||
| 22300 | 100 aa hypothetical protein | |||
| 22305 | M | M.YrupYR1ORFCP (100% identity) | M.Sal4054ORF22305P | |
| 22310 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17540 | DUF4917 family protein | |||
| ??? | R | Sal4053McrBP (100% identity) | Sal4054McrBP | |
| 17550 | R | Sal4053McrCP (100% identity) | Sal4054McrCP | |
| 17555 | DUF3320 domain-containing protein | |||