Shewanella algae CCU4052 |
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Putative Shewanella algae CCU4052 RM systems
Ref: Huang,Y.-T. unpublished
REBASE ref # 30419
| Sequence length: | GenBank #: | |
| Chromosome: | 4,787,275 bp | CP078515 |
| plasmid pCCU4052_01: | 132,655 bp | CP078516 |
REBASE acronym: Sal4052
Org_num: 51657
All begin KE622_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12635 | WYL domain-containing protein | |||
| 12640 | M | M.Sal4054ORF17520P (100% identity) | M.Sal4052ORF12640P | |
| 12645 | S | S.Sal4054ORF17520P (100% identity) | S.Sal4052ORF12640P | |
| 12650 | 110 aa hypothetical protein | |||
| 12655 | R | Sal4054ORF17520P (100% identity) | Sal4052ORF12640P | |
| 12660 | DUF4917 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 255 | SWIM zinc finger domain-containing protein | |||
| 260 | V | V.Sal4054ORF5140P (100% identity) | V.Sal4052ORF260P | |
| 265 | IS5 family transposase | |||
| 295 | ATP-binding protein | |||
| 300 | M | M.SalHIDEORF20240P (100% identity) | M.Sal4052ORF300P | |
| 305 | aminoglycoside phosphotransferase family | |||
| 3735 | AAA family ATPase | |||
| 3740 | M | M.Spu10738III (100% identity) | GATC | M.Sal4052DamP |
| 3745 | DUF2970 domain-containing protein | |||
| 16670 | DUF3319 domain-containing protein | |||
| ??? | M | M.Sal4054ORF21565P (100% identity) | M.Sal4052ORF16675P | |
| 16685 | 208 aa hypothetical protein | |||
| plasmid pCCU4052_01 | ||||
| 22215 | 100 aa hypothetical protein | |||
| 22220 | M | M.YrupYR1ORFCP (100% identity) | M.Sal4052ORF22220P | |
| 22225 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12660 | DUF4917 family protein | |||
| ??? | R | Sal4054McrBP (100% identity) | Sal4052McrBP | |
| 12670 | R | Sal4054McrCP (100% identity) | Sal4052McrCP | |
| 12675 | DUF3320 domain-containing protein | |||