Clostridioides difficile isolate MAR286 |
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Putative Clostridioides difficile isolate MAR286 RM systems
Ref: Imwattana,K. et al. unpublished
REBASE ref # 32668
Complete sequence: 4,242,261 bp
GenBank #: CP072118
REBASE acronym: CdiMAR286
Org_num: 50469
All begin J6L80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4530 | 159 aa hypothetical protein | |||
| 4535 | M | M.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | M.CdiMAR286ORF4535P |
| 4540 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.CdiMAR286ORF4535P |
| 4545 | 150 aa hypothetical protein | |||
| 4550 | 106 aa hypothetical protein | |||
| 4555 | 300 aa hypothetical protein | |||
| 4560 | R | PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | CdiMAR286ORF4535P |
| 4565 | 48 aa hypothetical protein | |||
| 5260 | tagatose-bisphosphate aldolase subunit GatY | |||
| 5265 | M | M.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | M.CdiMAR286ORF5265P |
| 5270 | S | S.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | S.CdiMAR286ORF5265P |
| 5275 | 102 aa hypothetical protein | |||
| 5280 | nucleotidyltransferase domain-containing | |||
| 5285 | 142 aa hypothetical protein | |||
| 5290 | R | PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | CdiMAR286ORF5265P |
| 5295 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6590 | Rrf2 family transcriptional regulator | |||
| 6595 | M | M.PdiBJ08ORFCP (100% identity) | CAAAAA | M.CdiMAR286ORF6595P |
| 6600 | patatin-like phospholipase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10040 | cell division protein | |||
| 10045 | R | PdiBJ08McrBP (100% identity) | CdiMAR286McrBP | |
| 10050 | R | PdiBJ08McrCP (100% identity) | CdiMAR286McrCP | |
| 10055 | sigma 54-interacting transcriptional regulator | |||