Escherichia coli FDAARGOS 1374 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli FDAARGOS 1374 RM systems
Ref: Walk,S. et al. unpublished
REBASE ref # 32723
| Sequence length: | GenBank #: | |
| Chromosome: | 5,116,935 bp | CP077314 |
| plasmid unnamed1: | 120,648 bp | CP077315 |
REBASE acronym: Eco1374
Org_num: 50664
All begin I6L04_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 275 | integrase | |||
| 280 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco1374ORF280P |
| 285 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco1374ORF280P |
| 290 | transposase | |||
| 1515 | IS3 family transposase | |||
| 1520 | R | Eco1375ORF13020P (100% identity) | Eco1374ORF1520P | |
| 1525 | sigma 54-interacting transcriptional regulator | |||
| 8790 | TrmB family transcriptional regulator | |||
| 8795 | M | M.EcoSCU125ORF5530P (100% identity) | A | M.Eco1374ORF8795P |
| 8815 | DUF1737 domain-containing protein | |||
| 12370 | drug/metabolite exporter YedA | |||
| 12375 | V | V.SflC32DcmP (74% identity) | V.Eco1374DcmP | |
| 12380 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1374DcmP |
| 12385 | phosphohydrolase | |||
| 12755 | 92 aa hypothetical protein | |||
| 12760 | M | M.Ecoppa4ORF685P (100% identity) | M.Eco1374ORF12760P | |
| 12765 | R | Ecoppa4ORF685P (100% identity) | Eco1374ORF12760P | |
| 12770 | DUF977 family protein | |||
| 15290 | NinE family protein | |||
| 15295 | M | M.Eco9172ORFGP (94% identity) | GATC | M.Eco1374ORF15295P |
| 15300 | recombination protein NinB | |||
| 20215 | DNA-binding transcriptional regulator Fis | |||
| 20220 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1374ORF20220P |
| 20225 | DUF2556 family protein | |||
| 20815 | ribulose-phosphate 3-epimerase | |||
| 20820 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1374DamP |
| 20825 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 25160 | 73 aa hypothetical protein | |||
| 25165 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1374ORF25165P |
| 25170 | 103 aa hypothetical protein | |||