Syntrophus aciditrophicus SB |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Syntrophus aciditrophicus SB RM systems
Ref: McInerney,M.J. et al. Proc. Natl. Acad. Sci. U.S.A. 104 (18), 7600-7605 (2007)
REBASE ref # 9288
Complete sequence: 3,179,300 bp
GenBank #: CP000252 (NC_007759)
REBASE acronym: SacSB
Org_num: 4252
All begin SYN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 493 | 51 aa hypothetical cytosolic protein | |||
| 494 | M | M.KstCSTR1ORF8570P (54% identity) | M.SacSBORF493P | |
| 495 | S | S.Bhy718ORF218P (27% identity) | S.SacSBORF493P | |
| 496 | 715 aa hypothetical cytosolic protein | |||
| 497 | R | KstCSTR1ORF8570P (79% identity) | SacSBORF493P | |
| 498 | 254 aa hypothetical exported protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2043 | 258 aa hypothetical membrane protein | |||
| 2042 | M | M.PspSCADCORF209235P (88% identity) | CAGCTG | M.SacSBORF2042P |
| 2041 | R | PspSCADCORF209235P (86% identity) | CAGCTG | SacSBORF2042P |
| 3225 | 83 aa hypothetical cytosolic protein | |||
| 523 | 53 aa hypothetical cytosolic protein | |||
| 524 | RM | TspS3ORF24390BP (33% identity) | SacSBORF524P | |
| 525 | predicted phosphohydrolase | |||
| 2754 | ATPases involved in DNA repair | |||
| 2752 | RM | DmcCG1ORF1205P (58% identity) | SacSBORF2752P | |
| 2751 | 237 aa hypothetical membrane protein | |||
| 1847 | ATPase of AAA+ superfamily | |||
| 1848 | M | M.SarUORFNP (82% identity) | M.SacSBORF1848P | |
| 1849 | ATP-dependent DNA helicase | |||
| 245 | transposase | |||
| 2995 | M | M.NbaLBB01ORF4405P (60% identity) | CTAG | M.SacSBORF2995P |
| 2435 | 214 aa hypothetical cytosolic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1823 | 475 aa hypothetical cytosolic protein | |||
| 1824 | R | DspWORF685P (88% identity) | SacSBORF1825P | |
| 1825 | M | M.AcrRTAORFDP (44% identity) | M.SacSBORF1825P | |
| 1826 | 232 aa hypothetical cytosolic protein | |||