Escherichia coli O170:H18 OLC-1056 |
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Putative Escherichia coli O170:H18 OLC-1056 RM systems
Ref: Weedmark,K. et al. unpublished
REBASE ref # 32731
| Sequence length: | GenBank #: | |
| Chromosome: | 4,863,942 bp | CP076706 |
| plasmid unnamed1: | 128,277 bp | CP076707 |
REBASE acronym: Eco1056
Org_num: 50708
All begin KQ217_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16350 | endoribonuclease SymE | |||
| 16355 | S | S.EcoS1283ORF1885P (100% identity) | CGAYNNNNNNNRTDCC | S.Eco1056ORF16360P |
| 16360 | M | M.EcoS1283ORF1885P (99% identity) | CGAYNNNNNNNRTDCC | M.Eco1056ORF16360P |
| 16365 | R | EcosLF82ORF3455P (99% identity) | CGAYNNNNNNNRTDCC | Eco1056ORF16360P |
| 16370 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3475 | drug/metabolite exporter YedA | |||
| 3480 | V | V.SflC32DcmP (74% identity) | V.Eco1056DcmP | |
| 3485 | M | M.SflC32DcmP (99% identity) | CCWGG | M.Eco1056DcmP |
| 3490 | phosphohydrolase | |||
| 10700 | DNA-binding transcriptional regulator Fis | |||
| 10705 | M | M.EcoVCSW5ORF2345P (99% identity) | ATGCAT | M.Eco1056ORF10705P |
| 10710 | DUF2556 family protein | |||
| 11315 | ribulose-phosphate 3-epimerase | |||
| 11320 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1056DamP |
| 11325 | cell division protein DamX | |||
| 16615 | TrmB family transcriptional regulator | |||
| 16620 | M | M.Eco299ORF21700P (92% identity) | M.Eco1056ORF16620P | |
| 16625 | IS21-like element IS100kyp family helper ATPase | |||
| 23590 | TrmB family transcriptional regulator | |||
| 23595 | M | M.Eco299ORF14265P (99% identity) | M.Eco1056ORF23595P | |
| 23615 | anti-adapter protein IraM | |||
| plasmid unnamed1 | ||||
| 24285 | 73 aa hypothetical protein | |||
| 24290 | M | M.Eco299ORF26255P (99% identity) | M.Eco1056ORF24290P | |
| 24295 | 104 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16160 | 120 aa hypothetical protein | |||
| 16165 | M | M.EcosLF82ORF3195P (100% identity) | M.Eco1056ORF16165P | |
| 16170 | R | EcosLF82ORF3195P (100% identity) | Eco1056ORF16165P | |
| 16175 | HNH endonuclease | |||