Escherichia coli O158:H23 OLC-1685 |
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Putative Escherichia coli O158:H23 OLC-1685 RM systems
Ref: Weedmark,K. et al. unpublished
REBASE ref # 32731
| Sequence length: | GenBank #: | |
| Chromosome: | 4,967,135 bp | CP076709 |
| plasmid unnamed1: | 86,487 bp | CP076710 |
| plasmid unnamed3: | 66,958 bp | CP076712 |
REBASE acronym: Eco1685
Org_num: 50707
All begin KQ220_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23515 | endoribonuclease SymE | |||
| 23520 | S | S.EcoSCU171ORF17935P (100% identity) | RTCANNNNNNNNRTRTC | S.Eco1685ORF23525P |
| 23525 | M | M.Sdy49345I (97% identity) | RTCANNNNNNNNRTRTC | M.Eco1685ORF23525P |
| 23530 | R | EcoSCU171ORF17935P (100% identity) | RTCANNNNNNNNRTRTC | Eco1685ORF23525P |
| 23535 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5335 | TrmB family transcriptional regulator | |||
| 5340 | M | M.Eco4221ORFBP (96% identity) | M.Eco1685ORF5340P | |
| 5355 | DUF1737 domain-containing protein | |||
| 10640 | drug/metabolite exporter YedA | |||
| 10645 | V | V.Eco4221DcmP (74% identity) | V.Eco1685DcmP | |
| 10650 | M | M.Eco4221DcmP (100% identity) | CCWGG | M.Eco1685DcmP |
| 10655 | phosphohydrolase | |||
| 14385 | DUF1737 domain-containing protein | |||
| 14400 | M | M.Eco4221ORFBP (96% identity) | M.Eco1685ORF14400P | |
| 14405 | TrmB family transcriptional regulator | |||
| 17905 | DNA-binding transcriptional regulator Fis | |||
| 17910 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco1685ORF17910P |
| 17915 | DUF2556 family protein | |||
| 18505 | ribulose-phosphate 3-epimerase | |||
| 18510 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1685DamP |
| 18515 | cell division protein DamX | |||
| 23315 | 59 aa hypothetical protein | |||
| 23320 | R | EcoLR13ORF25810P (100% identity) | Eco1685ORF23320P | |
| 23325 | HNH endonuclease | |||
| 23760 | TrmB family transcriptional regulator | |||
| 23765 | M | M.EcoPV0671ORF2384P (95% identity) | M.Eco1685ORF23765P | |
| 23785 | anti-adapter protein IraM | |||
| plasmid unnamed1 | ||||
| 23940 | 99 aa hypothetical protein | |||
| 23945 | M | M.EcoST410ORF25360P (95% identity) | M.Eco1685ORF23945P | |
| 23950 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 24845 | 103 aa hypothetical protein | |||
| 24850 | M | M.Sen527ORF25750P (100% identity) | M.Eco1685ORF24850P | |
| 24855 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23505 | DUF1127 domain-containing protein | |||
| 23510 | R | EcoC9705GmrD2P (100% identity) | Eco1685GmrDP | |
| 23515 | endoribonuclease SymE | |||