Escherichia coli S103EC |
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Putative Escherichia coli S103EC RM systems
Ref: Alvarez-Fraga,L. et al. unpublished
REBASE ref # 32733
| Sequence length: | GenBank #: | |
| Chromosome: | 5,181,038 bp | CP076693 |
| plasmid pS103EC_A: | 146,805 bp | CP076694 |
REBASE acronym: Eco103EC
Org_num: 50724
All begin KQ261_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1520 | ash family protein | |||
| 1525 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco103ECORF1530P |
| 1530 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco103ECORF1530P |
| 1535 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco103ECORF1530P |
| 1540 | type IV toxin-antitoxin system AbiEi family | |||
| 25020 | endoribonuclease SymE | |||
| 25025 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco103ECORF25035P |
| 25030 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco103ECORF25035P |
| 25035 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco103ECORF25035P |
| 25040 | restriction endonuclease | |||
| plasmid pS103EC_A | ||||
| 25915 | IS1 family transposase | |||
| 25920 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco103ECORF25930P |
| 25925 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco103ECORF25930P |
| 25930 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco103ECORF25930P |
| 25935 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5015 | 71 aa hypothetical protein | |||
| 5020 | M | M.KpnYN1ORFGP (89% identity) | M.Eco103ECORF5020P | |
| 5025 | helix-turn-helix domain-containing protein | |||
| 7250 | TrmB family transcriptional regulator | |||
| 7255 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco103ECORF7255P |
| 7270 | DUF3927 family protein | |||
| 10845 | EamA family transporter | |||
| 10850 | V | V.SflC32DcmP (74% identity) | V.Eco103ECDcmP | |
| 10855 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco103ECDcmP |
| 10860 | phosphohydrolase | |||
| 18270 | DNA-binding transcriptional regulator Fis | |||
| 18275 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco103ECORF18275P |
| 18280 | DUF2556 family protein | |||
| 18880 | ribulose-phosphate 3-epimerase | |||
| 18885 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco103ECDamP |
| 18890 | cell division protein DamX | |||
| 24680 | helix-turn-helix domain-containing protein | |||
| 24685 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco103ECORF24685P |
| 24690 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco103ECORF24685P |
| 24695 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco103ECORF24685P |
| 24700 | McrC family protein | |||
| plasmid pS103EC_A | ||||
| 25815 | 73 aa hypothetical protein | |||
| 25820 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco103ECORF25820P |
| 25825 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24695 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 24700 | R | EcosS9McrCP (100% identity) | Eco103ECMcrCP | |
| 24705 | R | EcosS3McrBP (100% identity) | Eco103ECMcrBP | |
| 24710 | glycosyltransferase | |||