Clostridioides difficile S-0942 |
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Putative Clostridioides difficile S-0942 RM systems
Ref: O'Grady,K.I. unpublished
REBASE ref # 32667
Complete sequence: 4,129,159 bp
GenBank #: CP076376
REBASE acronym: CdiS0942
Org_num: 50468
All begin KNZ76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16200 | 145 aa hypothetical protein | |||
| 16205 | R | CdiRSS2ORF3900P (100% identity) | AYGNNNNNNCTG | CdiS0942ORF16230P |
| 16210 | 300 aa hypothetical protein | |||
| 16215 | 106 aa hypothetical protein | |||
| 16220 | 150 aa hypothetical protein | |||
| 16225 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.CdiS0942ORF16230P |
| 16230 | M | M.CdiMta79ORF16515P (100% identity) | AYGNNNNNNCTG | M.CdiS0942ORF16230P |
| 16235 | 115 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6985 | 274 aa hypothetical protein | |||
| 6990 | M | M.CdiMta79ORF7100P (100% identity) | M.CdiS0942ORF6990P | |
| 6995 | helix-turn-helix transcriptional regulator | |||
| 14430 | patatin-like phospholipase family protein | |||
| 14435 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiS0942ORF14435P |
| 14440 | Rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10980 | sigma 54-interacting transcriptional regulator | |||
| 10985 | R | CdiMta79McrCP (100% identity) | CdiS0942McrCP | |
| 10990 | R | CdiMta79McrBP (100% identity) | CdiS0942McrBP | |
| 10995 | cell division protein | |||