Clostridioides difficile Cd29 |
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Putative Clostridioides difficile Cd29 RM systems
Ref: Zhao,C. unpublished
REBASE ref # 31777
Complete sequence: 4,186,793 bp
GenBank #: CP037797
REBASE acronym: CdiCd29
Org_num: 50455
All begin E1H52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17695 | 115 aa hypothetical protein | |||
| 17700 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.CdiCd29ORF17700P |
| 17705 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.CdiCd29ORF17700P |
| 17710 | 423 aa hypothetical protein | |||
| 17715 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | CdiCd29ORF17700P |
| 17720 | 111 aa hypothetical protein | |||
| 18240 | ketose-bisphosphate aldolase | |||
| 18245 | M | M.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | M.CdiCd29ORF18245P |
| 18250 | S | S.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | S.CdiCd29ORF18245P |
| 18255 | 102 aa hypothetical protein | |||
| 18260 | nucleotidyltransferase domain-containing | |||
| 18265 | 142 aa hypothetical protein | |||
| 18270 | R | CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | CdiCd29ORF18245P |
| 18275 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9075 | 69 aa hypothetical protein | |||
| 9080 | M | M.CdiS122ORF7470P (100% identity) | M.CdiCd29ORF9080P | |
| 9085 | 38 aa hypothetical protein | |||
| 13285 | 73 aa hypothetical protein | |||
| 13290 | M | M.Pdi30ORF7740P (100% identity) | M.CdiCd29ORF13290P | |
| 13295 | 38 aa hypothetical protein | |||
| 17780 | recombinase family protein | |||
| 17785 | M | M2.Pdi30ORF18765P (100% identity) | CATCG | M1.CdiCd29ORF17785P |
| 17790 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M2.CdiCd29ORF17785P |
| 17795 | 383 aa hypothetical protein | |||
| 17870 | 872 aa hypothetical protein | |||
| 17875 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.CdiCd29ORF17875P |
| 17880 | class B sortase | |||
| 19555 | Rrf2 family transcriptional regulator | |||
| 19560 | M | M.PdiZ31ORF1541P (99% identity) | CAAAAA | M.CdiCd29ORF19560P |
| 19565 | patatin-like phospholipase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3515 | cell division protein | |||
| 3520 | R | Pdi30McrBP (100% identity) | CdiCd29McrBP | |
| 3525 | R | Pdi30McrCP (100% identity) | CdiCd29McrCP | |
| 3530 | AAA family ATPase | |||