Salmonella enterica subsp. enterica serovar Mbandaka FDA0945290-S001-001 |
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Putative Salmonella enterica subsp. enterica serovar Mbandaka FDA0945290-S001-001 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,765,651 bp
GenBank #: CP075100
REBASE acronym: Sen82805
Org_num: 51597
All begin DSD36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19600 | 322 aa hypothetical protein | |||
| 19605 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen82805ORF19610P |
| 19610 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen82805ORF19610P |
| 19615 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen82805ORF19610P |
| 19620 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | cell division protein DamX | |||
| 1730 | M | M.StyTDamP (100% identity) | GATC | M.Sen82805DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen82805ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 5370 | zinc ribbon domain-containing protein | |||
| 5375 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.Sen82805ORF5375P |
| 5380 | 470 aa hypothetical protein | |||
| 9255 | phosphohydrolase | |||
| 9260 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen82805DcmP |
| 9265 | V | V.StyUK1DcmP (100% identity) | V.Sen82805DcmP | |
| 9270 | drug/metabolite exporter YedA | |||
| 19745 | IS3 family transposase | |||
| 19750 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.Sen82805ORF19750P |
| 19755 | R | SenXB08ORF19920P (100% identity) | RCCGGY | Sen82805ORF19750P |
| 19760 | 607 aa hypothetical protein | |||
| 19760 | 607 aa hypothetical protein | |||
| 19765 | R | SenXB08ORF19940P (100% identity) | Sen82805ORF19765P | |
| 19770 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17315 | 33 aa hypothetical protein | |||
| 17320 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen82805ORF17325P |
| 17325 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen82805ORF17325P |
| 17330 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5430 | TraR/DksA family transcriptional regulator | |||
| 5435 | M | M.Sen11548ORF10590P (100% identity) | M.Sen82805ORF5435P | |
| 5440 | replication endonuclease | |||