Salmonella enterica subsp. enterica serovar Newport CFSAN022621 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN022621 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,770,886 bp
GenBank #: CP075034
REBASE acronym: Sen22621
Org_num: 51603
All begin AA331_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19480 | NERD domain-containing protein | |||
| 19485 | S | S.Sens29927ORF20150P (100% identity) | S.Sen22621ORF19485P | |
| 19490 | N-6 DNA methylase | |||
| 19495 | restriction endonuclease | |||
| 19500 | M | M.SenN1543ORF23750P (100% identity) | CCGANNNNNGTC | M.Sen22621ORF19500P |
| 19505 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S.Sen22621ORF19500P |
| 19510 | R | SenN1543ORF23750P (100% identity) | CCGANNNNNGTC | Sen22621ORF19500P |
| 19515 | DUF91 domain-containing protein | |||
| 19730 | WYL domain-containing protein | |||
| 19735 | R | Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | Sen22621ORF19740P |
| 19740 | M | M.Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | M.Sen22621ORF19740P |
| 19745 | S | S.Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | S.Sen22621ORF19740P |
| 19750 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.Sen22621DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22621ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 5360 | 146 aa hypothetical protein | |||
| 5365 | M | M.SenS38AORF18010P (100% identity) | M.Sen22621ORF5365P | |
| 5370 | 104 aa hypothetical protein | |||
| 5405 | conserved phage C-terminal domain-containing | |||
| 5410 | M | M.SenCS16ORFGP (100% identity) | M.Sen22621ORF5410P | |
| 5415 | DNA cytosine methyltransferase | |||
| 5410 | phage N-6-adenine-methyltransferase | |||
| 5415 | M | M.SenL15ORF5555P (100% identity) | M.Sen22621ORF5415P | |
| 5420 | RusA family crossover junction | |||
| 9155 | phosphohydrolase | |||
| 9160 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen22621DcmP |
| 9165 | V | V.StyTDcmP (100% identity) | V.Sen22621DcmP | |
| 9170 | drug/metabolite exporter YedA | |||
| 19625 | YebC/PmpR family DNA-binding transcriptional | |||
| 19630 | R | SenXORF20240P (100% identity) | Sen22621ORF19630P | |
| 19635 | restriction endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17270 | 33 aa hypothetical protein | |||
| 17275 | R | Sens29927ORF17960P (100% identity) | CAGAG | Sen22621ORF17280P |
| 17280 | M | M.Sens29927ORF17960P (100% identity) | CAGAG | M.Sen22621ORF17280P |
| 17285 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19490 | N-6 DNA methylase | |||
| 19495 | R | Sens29927MrrP (100% identity) | Sen22621MrrP | |
| 19500 | type I restriction-modification system subunit | |||