Salmonella enterica subsp. enterica serovar Newport CFSAN022622 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN022622 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,781,894 bp
GenBank #: CP075033
REBASE acronym: Sen22622
Org_num: 51604
All begin AA317_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19490 | NERD domain-containing protein | |||
| 19495 | S | S.Sens29927ORF20150P (100% identity) | S.Sen22622ORF19495P | |
| 19500 | N-6 DNA methylase | |||
| 19505 | restriction endonuclease | |||
| 19510 | M | M.SenN1543ORF23750P (100% identity) | CCGANNNNNGTC | M.Sen22622ORF19510P |
| 19515 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S.Sen22622ORF19510P |
| 19520 | R | SenN1543ORF23750P (100% identity) | CCGANNNNNGTC | Sen22622ORF19510P |
| 19525 | DUF91 domain-containing protein | |||
| 19740 | WYL domain-containing protein | |||
| 19745 | R | Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | Sen22622ORF19750P |
| 19750 | M | M.Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | M.Sen22622ORF19750P |
| 19755 | S | S.Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | S.Sen22622ORF19750P |
| 19760 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.Sen22622DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22622ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 9045 | phosphohydrolase | |||
| 9050 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen22622DcmP |
| 9055 | V | V.StyTDcmP (100% identity) | V.Sen22622DcmP | |
| 9060 | drug/metabolite exporter YedA | |||
| 19635 | YebC/PmpR family DNA-binding transcriptional | |||
| 19640 | R | SenXORF20240P (100% identity) | Sen22622ORF19640P | |
| 19645 | restriction endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17190 | 33 aa hypothetical protein | |||
| 17195 | R | Sens29927ORF17960P (100% identity) | CAGAG | Sen22622ORF17200P |
| 17200 | M | M.Sens29927ORF17960P (100% identity) | CAGAG | M.Sen22622ORF17200P |
| 17205 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19500 | N-6 DNA methylase | |||
| 19505 | R | Sens29927MrrP (100% identity) | Sen22622MrrP | |
| 19510 | type I restriction-modification system subunit | |||