Salmonella enterica subsp. enterica serovar Pullorum CFSAN022627 |
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Putative Salmonella enterica subsp. enterica serovar Pullorum CFSAN022627 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,672,899 bp
GenBank #: CP075028
REBASE acronym: Sen22627
Org_num: 51614
All begin AA320_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19780 | restriction endonuclease | |||
| 19785 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen22627ORF19785P |
| 19790 | S | S.Ssp1806ORF19520P (100% identity) | GGYANNNNNNTCG | S.Sen22627ORF19785P |
| 19795 | R | StySBLI (36% identity) | GGYANNNNNNTCG | Sen22627ORF19785P |
| 19800 | aldehyde dehydrogenase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.Sen22627DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2725 | DUF2556 family protein | |||
| 2730 | M | M.Ssp1806ORF2265P (100% identity) | ATGCAT | M.Sen22627ORF2730P |
| 2735 | DNA-binding transcriptional regulator Fis | |||
| 5885 | TraR/DksA family transcriptional regulator | |||
| 5890 | M | M.SenCY16ORF17805P (100% identity) | GATC | M.Sen22627ORF5890P |
| 5895 | replication endonuclease | |||
| 10315 | phosphohydrolase | |||
| 10320 | M | M.Ssp1806DcmP (100% identity) | CCWGG | M.Sen22627DcmP |
| 10325 | V | V.StyUK1DcmP (100% identity) | V.Sen22627DcmP | |
| 10330 | drug/metabolite exporter YedA | |||
| 19895 | YebC/PmpR family DNA-binding transcriptional | |||
| 19900 | R | SenCY16ORF3680P (100% identity) | Sen22627ORF19900P | |
| 19905 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6815 | MFS transporter | |||
| 6820 | M | M.SenCY16ORF16870P (100% identity) | M.Sen22627ORF6820P | |
| 6825 | R | Ssp1806ORF16970P (99% identity) | Sen22627ORF6820P | |
| 6830 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19775 | N-6 DNA methylase | |||
| 19780 | R | Ssp1806MrrP (100% identity) | Sen22627MrrP | |
| 19785 | type I restriction-modification system subunit | |||