Salmonella enterica subsp. enterica serovar Newport CFSAN028549 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN028549 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,784,507 bp
GenBank #: CP074656
REBASE acronym: Sen28549
Org_num: 51606
All begin TL91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19245 | NERD domain-containing protein | |||
| 19250 | S | S.Sens29927ORF20150P (100% identity) | S.Sen28549ORF19250P | |
| 19255 | N-6 DNA methylase | |||
| 19260 | restriction endonuclease | |||
| 19265 | M | M.Sens29927ORF20165P (99% identity) | CCGANNNNNGTC | M.Sen28549ORF19265P |
| 19270 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S.Sen28549ORF19265P |
| 19275 | R | Sens29927ORF20165P (99% identity) | CCGANNNNNGTC | Sen28549ORF19265P |
| 19280 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.Sen28549DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen28549ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 9010 | phosphohydrolase | |||
| 9015 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen28549DcmP |
| 9020 | V | V.StyTDcmP (100% identity) | V.Sen28549DcmP | |
| 9025 | drug/metabolite exporter YedA | |||
| 13115 | RusA family crossover junction | |||
| 13120 | M | M.Sen1586ORF9025P (98% identity) | M.Sen28549ORF13120P | |
| 13125 | PerC family transcriptional regulator | |||
| 19390 | YebC/PmpR family DNA-binding transcriptional | |||
| 19395 | R | SenXORF20240P (100% identity) | Sen28549ORF19395P | |
| 19400 | ParA family protein | |||
| 19615 | 540 aa hypothetical protein | |||
| 19620 | M | M.SmaKZ11DndEP (100% identity) | M.Sen28549DndEP | |
| 19625 | DNA sulfur modification protein DndD | |||
| 19620 | DNA sulfur modification protein DndE | |||
| 19625 | M | M.SmaKZ11DndDP (100% identity) | M.Sen28549DndDP | |
| 19630 | DNA phosphorothioation system sulfurtransferase | |||
| 19625 | DNA sulfur modification protein DndD | |||
| 19630 | M | M.SmaKZ11DndCP (100% identity) | M.Sen28549DndCP | |
| 19635 | DNA sulfur modification protein DndB | |||
| 19630 | DNA phosphorothioation system sulfurtransferase | |||
| 19635 | M | M.SmaKZ11DndBP (100% identity) | M.Sen28549DndBP | |
| 19640 | 97 aa hypothetical protein | |||
| 21880 | replication endonuclease | |||
| 21885 | M | M.Sen60804ORF22425P (100% identity) | M.Sen28549ORF21885P | |
| 21890 | 127 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17155 | 33 aa hypothetical protein | |||
| 17160 | R | Sens29927ORF17960P (100% identity) | CAGAG | Sen28549ORF17165P |
| 17165 | M | M.Sens29927ORF17960P (100% identity) | CAGAG | M.Sen28549ORF17165P |
| 17170 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19255 | N-6 DNA methylase | |||
| 19260 | R | Sens29927MrrP (100% identity) | Sen28549MrrP | |
| 19265 | type I restriction-modification system subunit | |||