Salmonella enterica subsp. enterica serovar Shamba CFSAN029516 |
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Putative Salmonella enterica subsp. enterica serovar Shamba CFSAN029516 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,591,425 bp
GenBank #: CP074648
REBASE acronym: Sen29516
Org_num: 51621
All begin UM34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18580 | NERD domain-containing protein | |||
| 18585 | S | S.Sens29927ORF20150P (98% identity) | S.Sen29516ORF18585P | |
| 18590 | N-6 DNA methylase | |||
| 18595 | restriction endonuclease | |||
| 18600 | M | M.KpnKP51ORF13815P (99% identity) | CCGANNNNNGTC | M.Sen29516ORF18600P |
| 18605 | S | S2.SenS50ORF19940P (99% identity) | CCGANNNNNGTC | S.Sen29516ORF18600P |
| 18610 | R | Sens29927ORF20165P (99% identity) | CCGANNNNNGTC | Sen29516ORF18600P |
| 18615 | DUF91 domain-containing protein | |||
| 18740 | Fic family protein | |||
| 18745 | M | M.Sen8785III (100% identity) | GGANNNNNNGTTY | M.Sen29516ORF18745P |
| 18750 | S | S.Sen8785III (100% identity) | GGANNNNNNGTTY | S.Sen29516ORF18745P |
| 18755 | R | Sen8785IIIP (100% identity) | GGANNNNNNGTTY | Sen29516ORF18745P |
| 18760 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1710 | cell division protein DamX | |||
| 1715 | M | M.StyTDamP (100% identity) | GATC | M.Sen29516DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2200 | DUF2556 family protein | |||
| 2205 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen29516ORF2205P |
| 2210 | DNA-binding transcriptional regulator Fis | |||
| 8505 | phosphohydrolase | |||
| 8510 | M | M.Sen79101DcmP (99% identity) | CCWGG | M.Sen29516DcmP |
| 8515 | V | V.StyUK1DcmP (100% identity) | V.Sen29516DcmP | |
| 8520 | drug/metabolite exporter YedA | |||
| 12610 | Rrf2 family transcriptional regulator | |||
| 12615 | M | M2.SenUA36ORF1996P (99% identity) | M1.Sen29516ORF12615P | |
| 12620 | M | M1.SenUA36ORF1996P (96% identity) | M2.Sen29516ORF12615P | |
| 12625 | conserved phage C-terminal domain-containing | |||
| 18725 | YebC/PmpR family DNA-binding transcriptional | |||
| 18730 | R | SenAboORF8730P (99% identity) | Sen29516ORF18730P | |
| 18735 | FosA7 family fosfomycin resistance glutathione | |||
| 19555 | 921 aa hypothetical protein | |||
| 19560 | M | M.SenUA13ORF2340P (100% identity) | M.Sen29516ORF19560P | |
| 19565 | GNAT family N-acetyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16520 | 33 aa hypothetical protein | |||
| 16525 | R | Sen7388IP (100% identity) | CAGAG | Sen29516ORF16530P |
| 16530 | M | M.Sen8300ORF16170P (100% identity) | CAGAG | M.Sen29516ORF16530P |
| 16535 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18755 | type I restriction endonuclease subunit R | |||
| 18760 | R | SenS12VPHMrrP (100% identity) | Sen29516MrrP | |
| 18765 | ATP-binding protein | |||