Salmonella enterica subsp. enterica serovar Typhimurium L-4126 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium L-4126 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
Complete sequence: 4,968,591 bp
GenBank #: AP023291
REBASE acronym: Sen4126
Org_num: 51631
All begin SEL4126_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39300 | restriction endonuclease | |||
| 39310 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4126ORF39320P |
| 39320 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4126ORF39320P |
| 39330 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4126ORF39320P |
| 39340 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen4126DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4126ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 10570 | IS6 family transposase | |||
| 10580 | M | M.Ssp17155ORFGP (100% identity) | M.Sen4126ORF10580P | |
| 10590 | nuclease | |||
| 11920 | 174 aa hypothetical protein | |||
| 11930 | M | M.StyTORF1914P (100% identity) | M.Sen4126ORF11930P | |
| 11940 | 70 aa hypothetical protein | |||
| 18310 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen4126ORF18320P | |
| 18330 | crossover junction endodeoxyribonuclease rusA | |||
| 18770 | phosphohydrolase | |||
| 18780 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4126DcmP |
| 18790 | V | V.StyUK1DcmP (100% identity) | V.Sen4126DcmP | |
| 18800 | drug/metabolite exporter YedA | |||
| 39630 | 1213 aa hypothetical protein | |||
| 39640 | RM | StyUK1IV (100% identity) | GATCAG | Sen4126ORF39640P |
| 39650 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 34400 | 33 aa hypothetical protein | |||
| 34410 | R | StyUK1IP (99% identity) | CAGAG | Sen4126ORF34420P |
| 34420 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4126ORF34420P |
| 34430 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 39290 | membrane protein | |||
| 39300 | R | StyUK1MrrP (100% identity) | Sen4126MrrP | |
| 39310 | type I restriction-modification system | |||