Escherichia coli no107 |
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Putative Escherichia coli no107 RM systems
Ref: Lin,J. unpublished
REBASE ref # 27962
| Sequence length: | GenBank #: | |
| Chromosome: | 4,953,112 bp | CP075374 |
| plasmid unnamed1: | 279,642 bp | CP075378 |
| plasmid unnamed2: | 74,773 bp | CP075375 |
| plasmid unnamed3: | 88,195 bp | CP075376 |
| plasmid unnamed4: | 89,891 bp | CP075377 |
REBASE acronym: Eco107
Org_num: 50770
All begin KIB02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20265 | 322 aa hypothetical protein | |||
| 20270 | R | SflN107ORF19785P (100% identity) | Eco107ORF20275P | |
| 20275 | M | M.SspS13ORF3945P (100% identity) | M.Eco107ORF20275P | |
| 20280 | S | S.SflN107ORF19785P (100% identity) | S.Eco107ORF20275P | |
| 20285 | endoribonuclease SymE | |||
| plasmid unnamed2 | ||||
| 24260 | 62 aa hypothetical protein | |||
| 24265 | R | SenS1545ORF24780P (100% identity) | Eco107ORF24270P | |
| 24270 | M | M.SenS1545ORF24780P (100% identity) | M.Eco107ORF24270P | |
| 24275 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1900 | cell division protein DamX | |||
| 1905 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco107DamP |
| 1910 | ribulose-phosphate 3-epimerase | |||
| 2455 | DUF2556 family protein | |||
| 2460 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco107ORF2460P |
| 2465 | DNA-binding transcriptional regulator Fis | |||
| 6165 | Com family DNA-binding transcriptional | |||
| 6170 | M | M.SenYU39ORF1896P (99% identity) | M.Eco107ORF6170P | |
| 6175 | ribosome-associated translation inhibitor RaiA | |||
| 7475 | recombination protein NinB | |||
| 7480 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco107ORF7480P |
| 7485 | NinE family protein | |||
| 7770 | recombination protein NinB | |||
| 7775 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco107ORF7775P |
| 7780 | NinE family protein | |||
| 10075 | phosphohydrolase | |||
| 10080 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco107DcmP |
| 10085 | V | V.SflFF64DcmP (100% identity) | V.Eco107DcmP | |
| 10090 | drug/metabolite exporter YedA | |||
| 20465 | HNH endonuclease | |||
| 20470 | R | EcosEC9ORF12570P (100% identity) | Eco107ORF20470P | |
| 20475 | 332 aa hypothetical protein | |||
| 20720 | conjugal transfer protein TraG N-terminal | |||
| 20725 | R | SflN107ORF20240P (100% identity) | Eco107ORF20725P | |
| 20730 | cell surface composition regulator GlgS | |||
| plasmid unnamed1 | ||||
| 25360 | 202 aa hypothetical protein | |||
| 25365 | M | M.YpsF1ORFBP (100% identity) | M.Eco107ORF25365P | |
| 25370 | 48 aa hypothetical protein | |||
| 25955 | thermonuclease family protein | |||
| 25960 | M | M.YpsF1ORFCP (100% identity) | M.Eco107ORF25960P | |
| 25965 | 55 aa hypothetical protein | |||
| 26675 | 284 aa hypothetical protein | |||
| 26680 | M | M.YpsF1ORFDP (100% identity) | M.Eco107ORF26680P | |
| 26685 | DNA-binding protein | |||
| plasmid unnamed2 | ||||
| 23985 | 97 aa hypothetical protein | |||
| 23990 | M | M.Xca80ORFEP (100% identity) | M.Eco107ORF23990P | |
| 23995 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 24320 | 101 aa hypothetical protein | |||
| 24325 | M | M.SflFF3ORF25360P (100% identity) | M.Eco107ORF24325P | |
| 24330 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 24820 | 101 aa hypothetical protein | |||
| 24825 | M | M.SflFF3ORF25360P (100% identity) | M.Eco107ORF24825P | |
| 24830 | 73 aa hypothetical protein | |||