Salmonella enterica subsp. enterica serovar Paratyphi B CFSAN000540 |
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Putative Salmonella enterica subsp. enterica serovar Paratyphi B CFSAN000540 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,588,964 bp
GenBank #: CP074610
REBASE acronym: Sen2238
Org_num: 51610
All begin CAI53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19000 | restriction endonuclease | |||
| 19005 | R | Sen5706IP (100% identity) | GCANNNNNNNNTTTG | Sen2238ORF19010P |
| 19010 | M | M.Sen5706I (100% identity) | GCANNNNNNNNTTTG | M.Sen2238ORF19010P |
| 19015 | S | S.Sen5706I (100% identity) | GCANNNNNNNNTTTG | S.Sen2238ORF19010P |
| 19020 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | cell division protein DamX | |||
| 1690 | M | M.StyTDamP (100% identity) | GATC | M.Sen2238DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2175 | DUF2556 family protein | |||
| 2180 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2238ORF2180P |
| 2185 | DNA-binding transcriptional regulator Fis | |||
| 5325 | 154 aa hypothetical protein | |||
| 5330 | M | M.PspLij88ORF8420P (100% identity) | M.Sen2238ORF5330P | |
| 5335 | 492 aa hypothetical protein | |||
| 8595 | phosphohydrolase | |||
| 8600 | M | M.Sens29882DcmP (99% identity) | CCWGG | M.Sen2238DcmP |
| 8605 | V | V.StyUK1DcmP (100% identity) | V.Sen2238DcmP | |
| 8610 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16905 | 33 aa hypothetical protein | |||
| 16910 | R | Sens30601ORF17060P (99% identity) | CAGAG | Sen2238ORF16915P |
| 16915 | M | M.StyTORF2507P (99% identity) | CAGAG | M.Sen2238ORF16915P |
| 16920 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18995 | BrnT family toxin | |||
| 19000 | R | StyTMrrP (100% identity) | Sen2238MrrP | |
| 19005 | type I restriction-modification system | |||