Salmonella enterica subsp. enterica serovar Paratyphi B CFSAN000542 |
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Putative Salmonella enterica subsp. enterica serovar Paratyphi B CFSAN000542 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,804,097 bp
GenBank #: CP074619
REBASE acronym: Sen2240
Org_num: 51612
All begin CAI54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3940 | endoribonuclease SymE | |||
| 3945 | S | S.Sen5706I (100% identity) | GCANNNNNNNNTTTG | S.Sen2240ORF3950P |
| 3950 | M | M.Sen5706I (100% identity) | GCANNNNNNNNTTTG | M.Sen2240ORF3950P |
| 3955 | R | Sen5706IP (100% identity) | GCANNNNNNNNTTTG | Sen2240ORF3950P |
| 3960 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1845 | cell division protein DamX | |||
| 1850 | M | M.StyTDamP (100% identity) | GATC | M.Sen2240DamP |
| 1855 | ribulose-phosphate 3-epimerase | |||
| 15265 | drug/metabolite exporter YedA | |||
| 15270 | V | V.StyUK1DcmP (100% identity) | V.Sen2240DcmP | |
| 15275 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen2240DcmP |
| 15280 | phosphohydrolase | |||
| 21990 | site-specific integrase | |||
| 21995 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen2240ORF21995P |
| 22000 | DUF2556 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6085 | MFS transporter | |||
| 6090 | M | M.SenS709ORF23205P (100% identity) | CAGAG | M.Sen2240ORF6090P |
| 6095 | R | Sen5706IIP (99% identity) | CAGAG | Sen2240ORF6090P |
| 6100 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3955 | type I restriction-modification system | |||
| 3960 | R | StyTMrrP (100% identity) | Sen2240MrrP | |
| 3965 | BrnT family toxin | |||