Pseudomonas qingdaonensis S-1 |
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Putative Pseudomonas qingdaonensis S-1 RM systems
Ref: Chen,D.Z. et al. J Hazard Mater 302, 232-240 (2016)
REBASE ref # 32422
Complete sequence: 5,938,989 bp
GenBank #: CP074676
REBASE acronym: PqiS1
Org_num: 49390
All begin KH389_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23780 | AAA family ATPase | |||
| 23785 | S | S.SspAg2ORF4615P (76% identity) | S.PqiS1ORF23790P | |
| 23790 | M | M.PspE001ORF11935P (87% identity) | M.PqiS1ORF23790P | |
| 23795 | R | Pfu818ORFAP (93% identity) | PqiS1ORF23790P | |
| 23800 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1430 | AAA family ATPase | |||
| 1435 | M | M.PveT1ORF31545P (87% identity) | M.PqiS1ORF1435P | |
| 1440 | nucleotidyltransferase domain-containing | |||
| 7240 | 220 aa hypothetical protein | |||
| 7245 | M | M.PtaWRS8ORF7935P (89% identity) | M.PqiS1ORF7245P | |
| 7250 | 507 aa hypothetical protein | |||
| 17825 | 420 aa hypothetical protein | |||
| 17830 | M | M.Psi21052DndBP (98% identity) | M.PqiS1DndBP | |
| 17835 | DNA phosphorothioation system sulfurtransferase | |||
| 17830 | DNA sulfur modification protein DndB | |||
| 17835 | M | M.PchL5734DndCP (99% identity) | M.PqiS1DndCP | |
| 17840 | DNA sulfur modification protein DndD | |||
| 17835 | DNA phosphorothioation system sulfurtransferase | |||
| 17840 | M | M.PchL5734DndDP (99% identity) | M.PqiS1DndDP | |
| 17845 | DndE family protein | |||
| 17840 | DNA sulfur modification protein DndD | |||
| 17845 | M | M.Pvi35DndEP (91% identity) | M.PqiS1DndEP | |
| 17850 | DNA phosphorothioation-associated protein 4 | |||