Salmonella species SJTUF14523 |
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Putative Salmonella species SJTUF14523 RM systems
Ref: Zhang,Z. and Shi,X. unpublished
REBASE ref # 32361
| Sequence length: | GenBank #: | |
| Chromosome: | 4,679,991 bp | CP074428 |
| plasmid p14523A: | 85,862 bp | CP074429 |
REBASE acronym: Ssp14523
Org_num: 49082
All begin KFD69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19370 | NERD domain-containing protein/DEAD/DEAH box | |||
| 19375 | M | M.SspSAL045ORF19385P (100% identity) | GGYANNNNNNTCG | M.Ssp14523ORF19375P |
| 19380 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Ssp14523ORF19375P |
| 19385 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Ssp14523ORF19375P |
| 19390 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Ssp14523DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Ssp14523ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8895 | PerC family transcriptional regulator | |||
| ??? | M | M.SspSAL045ORF8900P (100% identity) | M.Ssp14523ORF8900P | |
| 8905 | RusA family crossover junction | |||
| 13755 | drug/metabolite exporter YedA | |||
| 13760 | V | V.StyUK1DcmP (100% identity) | V.Ssp14523DcmP | |
| 13765 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Ssp14523DcmP |
| 13770 | phosphohydrolase | |||
| 19500 | YebC/PmpR family DNA-binding transcriptional | |||
| 19505 | R | SspSAL045ORF19515P (100% identity) | Ssp14523ORF19505P | |
| 19510 | IS3 family transposase | |||
| plasmid p14523A | ||||
| 22985 | 103 aa hypothetical protein | |||
| 22990 | M | M.SsoL4094ORF24730P (100% identity) | M.Ssp14523ORF22990P | |
| 22995 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17285 | 33 aa hypothetical protein | |||
| 17290 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Ssp14523ORF17295P |
| 17295 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Ssp14523ORF17295P |
| 17300 | MFS transporter | |||