Salmonella species SJTUF15034 |
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Putative Salmonella species SJTUF15034 RM systems
Ref: Zhang,Z. and Shi,X. unpublished
REBASE ref # 32361
| Sequence length: | GenBank #: | |
| Chromosome: | 4,679,426 bp | CP074425 |
| plasmid p15034A: | 101,606 bp | CP074426 |
REBASE acronym: Ssp15034
Org_num: 49083
All begin KFD68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19370 | NERD domain-containing protein/DEAD/DEAH box | |||
| 19375 | M | M.SspSAL045ORF19385P (100% identity) | GGYANNNNNNTCG | M.Ssp15034ORF19375P |
| 19380 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Ssp15034ORF19375P |
| 19385 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Ssp15034ORF19375P |
| 19390 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Ssp15034DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Ssp15034ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8895 | PerC family transcriptional regulator | |||
| ??? | M | M.SspSAL045ORF8900P (100% identity) | M.Ssp15034ORF8900P | |
| 8905 | RusA family crossover junction | |||
| 13760 | drug/metabolite exporter YedA | |||
| 13765 | V | V.StyUK1DcmP (100% identity) | V.Ssp15034DcmP | |
| 13770 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Ssp15034DcmP |
| 13775 | phosphohydrolase | |||
| 19500 | YebC/PmpR family DNA-binding transcriptional | |||
| 19505 | R | SspSAL045ORF19515P (100% identity) | Ssp15034ORF19505P | |
| 19510 | IS3 family transposase | |||
| plasmid p15034A | ||||
| 23190 | 97 aa hypothetical protein | |||
| 23195 | M | M.Xca80ORFEP (100% identity) | M.Ssp15034ORF23195P | |
| 23200 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17285 | 33 aa hypothetical protein | |||
| 17290 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Ssp15034ORF17295P |
| 17295 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Ssp15034ORF17295P |
| 17300 | MFS transporter | |||