Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN004345 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN004345 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
| Sequence length: | GenBank #: | |
| Chromosome: | 4,750,952 bp | CP074302 |
| plasmid pCFSAN004345: | 107,443 bp | CP074303 |
REBASE acronym: Sen4345
Org_num: 12889
All begin JYN30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19805 | restriction endonuclease | |||
| 19810 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4345ORF19815P |
| 19815 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4345ORF19815P |
| 19820 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4345ORF19815P |
| 19825 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1715 | cell division protein DamX | |||
| 1720 | M | M.StyTDamP (100% identity) | GATC | M.Sen4345DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2205 | DUF2556 family protein | |||
| 2210 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4345ORF15295P |
| 2215 | DNA-binding transcriptional regulator Fis | |||
| 5375 | tyrosine-type recombinase/integrase | |||
| 5380 | M | M.Sens29958ORF5585P (100% identity) | M.Sen4345ORF5380P | |
| 5385 | AAA family ATPase | |||
| 5455 | conserved phage C-terminal domain-containing | |||
| 5460 | M | M.Sens29958ORF5665P (100% identity) | M.Sen4345ORF5460P | |
| 5465 | RusA family crossover junction | |||
| 9250 | PerC family transcriptional regulator | |||
| 9255 | M | M.StyUK1V (100% identity) | GATC | M.Sen4345ORF9255P |
| 9260 | RusA family crossover junction | |||
| 9495 | phosphohydrolase | |||
| 9500 | M | M.SenS688DcmP (100% identity) | CCWGG | M.Sen4345DcmP |
| 9505 | V | V.StyUK1DcmP (100% identity) | V.Sen4345DcmP | |
| 9510 | drug/metabolite exporter YedA | |||
| 15710 | ead/Ea22-like family protein | |||
| 15715 | M | M.Ssp15303ORFAP (100% identity) | M.Sen4345ORF15715P | |
| 15720 | DUF551 domain-containing protein | |||
| 19965 | BREX system P-loop protein BrxC | |||
| 19970 | RM | StyUK1IV (100% identity) | GATCAG | Sen4345ORF19970P |
| 19975 | AAA family ATPase | |||
| plasmid pCFSAN004345 | ||||
| 23170 | 118 aa hypothetical protein | |||
| 23175 | M | M.StyUK1ORFAP (100% identity) | M.Sen4345ORF23175P | |
| 23180 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17740 | 33 aa hypothetical protein | |||
| 17745 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen4345ORF14890P |
| 17750 | M | M.SenRM074ORF17420P (100% identity) | CAGAG | M.Sen4345ORF14890P |
| 17755 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19800 | BrnT family toxin | |||
| 19805 | R | StyUK1MrrP (100% identity) | Sen4345MrrP | |
| 19810 | type I restriction-modification system | |||