Salmonella enterica subsp. enterica serovar Typhimurium SO_8752_Stm |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SO_8752_Stm RM systems
Ref: Kakatkar,A.S. et al. unpublished
REBASE ref # 32359
| Sequence length: | GenBank #: | |
| Chromosome: | 4,857,450 bp | CP074092 |
| plasmid pSLT: | 93,933 bp | CP074093 |
REBASE acronym: Sen8752
Org_num: 49077
All begin KFK83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23070 | endoribonuclease SymE | |||
| 23075 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8752ORF23080P |
| 23080 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8752ORF23080P |
| 23085 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen8752ORF23080P |
| 23090 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10225 | drug/metabolite exporter YedA | |||
| 10230 | V | V.StyUK1DcmP (100% identity) | V.Sen8752DcmP | |
| 10235 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8752DcmP |
| 10240 | phosphohydrolase | |||
| 17335 | DNA-binding transcriptional regulator Fis | |||
| 17340 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8752ORF17340P |
| 17345 | DUF2556 family protein | |||
| 17830 | ribulose-phosphate 3-epimerase | |||
| 17835 | M | M.StyTDamP (100% identity) | GATC | M.Sen8752DamP |
| 17840 | cell division protein DamX | |||
| 22920 | AAA family ATPase | |||
| 22925 | RM | StyUK1IV (100% identity) | GATCAG | Sen8752ORF22925P |
| 22930 | BREX system P-loop protein BrxC | |||
| plasmid pSLT | ||||
| 23760 | 118 aa hypothetical protein | |||
| 23765 | M | M.StyUK1ORFAP (100% identity) | M.Sen8752ORF23765P | |
| 23770 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | MFS transporter | |||
| 1815 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8752ORF1815P |
| 1820 | R | StyUK1IP (99% identity) | CAGAG | Sen8752ORF1815P |
| 1825 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23085 | type I restriction-modification system | |||
| 23090 | R | StyUK1MrrP (100% identity) | Sen8752MrrP | |
| 23095 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14025 | replication endonuclease | |||
| 14030 | M | M.StyLTORF13745P (100% identity) | M.Sen8752ORF14030P | |
| 14035 | TraR/DksA family transcriptional regulator | |||