Prevotella denticola F0288 |
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Putative Prevotella denticola F0288 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 1,872,001 bp | CP072371 |
| chromosome 2: | 1,066,121 bp | CP072372 |
REBASE acronym: PdeF0288
Org_num: 48648
All begin J4860_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1330 | AAA family ATPase | |||
| 1335 | M | M.Pde289ORF950P (100% identity) | GASTC | M.PdeF0288III |
| 1340 | C | C.Pde289ORF950P (100% identity) | C.PdeF0288IIIP | |
| 1345 | 65 aa hypothetical protein | |||
| 5255 | type II restriction endonuclease | |||
| 5260 | RM | Pde289ORF1801P (99% identity) | PdeF0288ORF5260P | |
| 5265 | SNF2/RAD54 family helicase | |||
| chromosome 2 | ||||
| 10060 | HU family DNA-binding protein | |||
| 10065 | M | M.Pde289ORF2263P (96% identity) | CTAG | M.PdeF0288I |
| 10070 | 108 aa hypothetical protein | |||
| 10075 | R | Pin2832ORF6790P (100% identity) | CTAG | PdeF0288IP |
| 10080 | tyrosine-type recombinase/integrase | |||
| 11065 | DEAD/DEAH box helicase family protein | |||
| 11070 | RM | Pde289ORF2047P (100% identity) | PdeF0288ORF11070P | |
| 11075 | 285 aa hypothetical protein | |||
| 11240 | SusC/RagA family TonB-linked outer membrane | |||
| 11245 | M | M.Pde289ORF2009P (99% identity) | CTGCAG | M.PdeF0288II |
| 11250 | R | Pde289ORF2009P (100% identity) | CTGCAG | PdeF0288IIP |
| 11255 | outer membrane beta-barrel protein | |||