Escherichia coli O68:H12 97.3 |
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Putative Escherichia coli O68:H12 97.3 RM systems
Ref: Guragain,M. et al. Appl Environ Microbiol 87 (7), e02343-20 (2021)
REBASE ref # 31845
| Sequence length: | GenBank #: | |
| Chromosome: | 4,795,009 bp | CP061758 |
| plasmid unnamed1: | 151,454 bp | CP061759 |
| plasmid unnamed3: | 172,576 bp | CP061760 |
REBASE acronym: Eco973
Org_num: 46737
All begin IEC98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5185 | 197 aa hypothetical protein | |||
| 5190 | R | EcoPO3ORF6130P (99% identity) | Eco973ORF5200P | |
| 5195 | S | S.EcoPO3ORF6130P (100% identity) | S.Eco973ORF5200P | |
| ??? | M | M.KpnS1313ORF16435P (99% identity) | M.Eco973ORF5200P | |
| 5205 | 119 aa hypothetical protein | |||
| 19820 | 322 aa hypothetical protein | |||
| 19825 | R | Ecou015ORF19665P (100% identity) | Eco973ORF19830P | |
| 19830 | M | M.EcoWS38ORF11185P (100% identity) | M.Eco973ORF19830P | |
| 19835 | S | S.Ecou015ORF19665P (100% identity) | S.Eco973ORF19830P | |
| 19840 | group II intron reverse transcriptase/maturase | |||
| 20805 | DUF262 domain-containing protein | |||
| 20810 | M | M.EcoK2921ORF21790P (100% identity) | M.Eco973ORF20810P | |
| 20815 | S | S.EcoK2921ORF21790P (100% identity) | S.Eco973ORF20810P | |
| 20820 | R | EcoCPE35ORF5500P (99% identity) | Eco973ORF20810P | |
| 20825 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1990 | cell division protein DamX | |||
| 1995 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco973DamP |
| 2000 | ribulose-phosphate 3-epimerase | |||
| 2620 | DUF2556 family protein | |||
| 2625 | M | M.Ecou015ORF2460P (100% identity) | ATGCAT | M.Eco973ORF2625P |
| 2630 | DNA-binding transcriptional regulator Fis | |||
| 5685 | IS66 family transposase | |||
| 5690 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Eco973ORF5690P |
| 5695 | DEAD/DEAH box helicase | |||
| 9260 | phosphohydrolase | |||
| 9265 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco973DcmP |
| 9270 | V | V.Ecou015DcmP (100% identity) | V.Eco973DcmP | |
| 9275 | drug/metabolite exporter YedA | |||
| 11845 | 71 aa hypothetical protein | |||
| 11850 | M | M.Eco453ORF15270P (100% identity) | M.Eco973ORF11850P | |
| 11855 | 177 aa hypothetical protein | |||
| 15710 | NinE family protein | |||
| 15715 | M | M.Eco70218ORF23095P (98% identity) | GATC | M.Eco973ORF15715P |
| 15720 | recombination protein NinB | |||
| 17335 | HNH endonuclease | |||
| 17340 | R | SflFF59ORF5690P (100% identity) | Eco973ORF17340P | |
| 17345 | IS630-like element ISEc33 family transposase | |||
| 21500 | class II holin family protein | |||
| 21505 | M | M.Eco7152ORF1666P (95% identity) | M.Eco973ORF21505P | |
| 21510 | 67 aa hypothetical protein | |||
| 21540 | LexA family transcriptional regulator | |||
| 21545 | M | M.Eco4705ORFHP (100% identity) | GATC | M.Eco973ORF21545P |
| 21550 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 23610 | 82 aa hypothetical protein | |||
| 23615 | M | M.RorCRE01ORF21130P (100% identity) | M.Eco973ORF23615P | |
| 23620 | SOS response-associated peptidase family | |||
| plasmid unnamed3 | ||||
| 24260 | 104 aa hypothetical protein | |||
| 24265 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco973ORF24265P |
| 24270 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19845 | endoribonuclease SymE | |||
| 19850 | R | Ecou015GmrSDP (100% identity) | Eco973GmrSDP | |
| 19855 | DUF1127 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15125 | replication endonuclease | |||
| 15130 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco973ORF15130P |
| 15135 | TraR/DksA family transcriptional regulator | |||