Burkholderia pseudomallei VBP399 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia pseudomallei VBP399 RM systems
Ref: Balaji,V. et al. unpublished
REBASE ref # 31793
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,071,067 bp | CP071757 |
| chromosome 2: | 3,199,869 bp | CP071758 |
REBASE acronym: Bpa399
Org_num: 46489
All begin J3E55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1255 | 94 aa hypothetical protein | |||
| ??? | M | M.Bps165ORF866P (94% identity) | M.Bpa399ORF1260P | |
| 1265 | S | S.PbaSpa11ORF35950P (45% identity) | S.Bpa399ORF1260P | |
| 1270 | SIR2 family protein | |||
| 1275 | R | Bps165ORF866P (86% identity) | Bpa399ORF1260P | |
| 1280 | 75 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13130 | immunity 52 family protein | |||
| 13135 | M | M.BpsEY1ORF4267P (100% identity) | M.Bpa399ORF13135P | |
| 13140 | lysis protein | |||
| 13350 | 473 aa hypothetical protein | |||
| 13355 | M | M.BpsEY1ORF4311P (100% identity) | M.Bpa399ORF13355P | |
| 13360 | site-specific integrase | |||
| 17705 | 131 aa hypothetical protein | |||
| 17710 | M | M.BpsP21885ORF7860P (99% identity) | M.Bpa399ORF17710P | |
| 17715 | phage baseplate assembly protein V | |||
| chromosome 2 | ||||
| 27580 | tryptophan synthase subunit beta | |||
| 27585 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bpa399ORF27585P |
| 27590 | tryptophan synthase subunit alpha | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 175 | porin | |||
| 180 | R | BpsBEGORF4502P (99% identity) | CACAG | Bpa399ORF185P |
| 185 | M | M.BpsWC19ORF185P (100% identity) | CACAG | M.Bpa399ORF185P |
| 190 | porin | |||