Salmonella species SAL-020 |
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Putative Salmonella species SAL-020 RM systems
Ref: zhao,w. and li,r. unpublished
REBASE ref # 31886
Complete sequence: 4,679,997 bp
GenBank #: CP071690
REBASE acronym: SspSAL020
Org_num: 46970
All begin J1G48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19375 | NERD domain-containing protein/DEAD/DEAH box | |||
| 19380 | M | M.SspSAL045ORF19385P (100% identity) | GGYANNNNNNTCG | M.SspSAL020ORF19380P |
| 19385 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SspSAL020ORF19380P |
| 19390 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SspSAL020ORF19380P |
| 19395 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.SspSAL020DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.SspSAL020ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8895 | PerC family transcriptional regulator | |||
| ??? | M | M.SspSAL045ORF8900P (100% identity) | M.SspSAL020ORF8900P | |
| 8905 | RusA family crossover junction | |||
| 13750 | drug/metabolite exporter YedA | |||
| 13755 | V | V.StyUK1DcmP (100% identity) | V.SspSAL020DcmP | |
| 13760 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SspSAL020DcmP |
| 13765 | phosphohydrolase | |||
| 19505 | YebC/PmpR family DNA-binding transcriptional | |||
| 19510 | R | SspSAL045ORF19515P (100% identity) | SspSAL020ORF19510P | |
| 19515 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17280 | 33 aa hypothetical protein | |||
| 17285 | R | SspSAL045ORF17295P (100% identity) | CAGAG | SspSAL020ORF17290P |
| 17290 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.SspSAL020ORF17290P |
| 17295 | MFS transporter | |||