Escherichia coli ECY44 |
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Putative Escherichia coli ECY44 RM systems
Ref: Yang,Y. and Liu,J. unpublished
REBASE ref # 31824
| Sequence length: | GenBank #: | |
| Chromosome: | 4,759,245 bp | CP069706 |
| plasmid pECY44-1: | 239,330 bp | CP069702 |
| plasmid pECY44-2: | 135,712 bp | CP069703 |
| plasmid pECY44-3: | 105,203 bp | CP069704 |
REBASE acronym: EcoECY44
Org_num: 46556
All begin JR341_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6870 | transposase | |||
| 6875 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoECY44ORF6880P |
| 6880 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoECY44ORF6880P |
| 6885 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoECY44ORF6880P |
| 6890 | AAA family ATPase | |||
| 22895 | toll/interleukin-1 receptor domain-containing | |||
| 22900 | M | M.EcoYA1ORF20480P (100% identity) | M.EcoECY44ORF22900P | |
| 22905 | S | S.EcoYA1ORF20480P (100% identity) | S.EcoECY44ORF22900P | |
| 22910 | DUF4268 domain-containing protein | |||
| 22915 | R | EcoYA1ORF20480P (100% identity) | EcoECY44ORF22900P | |
| 22920 | 165 aa hypothetical protein | |||
| plasmid pECY44-3 | ||||
| 2215 | type II toxin-antitoxin system Phd/YefM family | |||
| 2220 | M | M.SspS13ORF175P (100% identity) | M.EcoECY44ORF2220P | |
| 2225 | IS6-like element IS26 family transposase | |||
| 2370 | IS6-like element IS26 family transposase | |||
| 2375 | S | S.SspS13ORF175P (90% identity) | S.EcoECY44ORF2375P | |
| 2380 | R | KpnLL83ORF1P (100% identity) | EcoECY44ORF2375P | |
| 2385 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4545 | cell division protein DamX | |||
| 4550 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoECY44DamP |
| 4555 | ribulose-phosphate 3-epimerase | |||
| 5100 | DUF2556 family protein | |||
| 5105 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoECY44ORF5105P |
| 5110 | DNA-binding transcriptional regulator Fis | |||
| 8920 | tyrosine-type recombinase/integrase | |||
| 8925 | M | M.Ecoi64ORF2425P (100% identity) | M.EcoECY44ORF8925P | |
| 8930 | AAA family ATPase | |||
| 9035 | 67 aa hypothetical protein | |||
| 9040 | M | M.Sso63633ORF22290P (100% identity) | M.EcoECY44ORF9040P | |
| 9045 | phage lysis protein EssD | |||
| 10485 | ead/Ea22-like family protein | |||
| 10490 | M | M.EcoYA1ORF6980P (100% identity) | M.EcoECY44ORF10490P | |
| 10495 | 203 aa hypothetical protein | |||
| 10590 | recombination protein NinB | |||
| 10595 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoECY44ORF10595P |
| 10600 | NinE family protein | |||
| 12075 | phosphohydrolase | |||
| 12080 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoECY44DcmP |
| 12085 | V | V.SsoSE61DcmP (100% identity) | V.EcoECY44DcmP | |
| 12090 | drug/metabolite exporter YedA | |||
| 22920 | 165 aa hypothetical protein | |||
| 22925 | R | EcoYA1ORF20505P (100% identity) | GAAC | EcoECY44ORF22925P |
| 22930 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pECY44-1 | ||||
| 660 | 55 aa hypothetical protein | |||
| 665 | M | M.YpsF1ORFCP (100% identity) | M.EcoECY44ORF665P | |
| 670 | thermonuclease family protein | |||
| 1120 | 48 aa hypothetical protein | |||
| 1125 | M | M.YpsF1ORFBP (100% identity) | M.EcoECY44ORF1125P | |
| 1130 | 202 aa hypothetical protein | |||
| 1235 | DNA-binding protein | |||
| 1240 | M | M.YpsF1ORFDP (100% identity) | M.EcoECY44ORF1240P | |
| 1245 | 284 aa hypothetical protein | |||
| plasmid pECY44-2 | ||||
| 1565 | 104 aa hypothetical protein | |||
| 1570 | M | M.EcoM9754ORF47080P (100% identity) | M.EcoECY44ORF1570P | |
| 1575 | 73 aa hypothetical protein | |||
| plasmid pECY44-3 | ||||
| 2475 | tellurite/colicin resistance protein | |||
| 2490 | M | M.EcoTHO010ORF40010P (100% identity) | M.EcoECY44ORF2490P | |
| 2495 | recombination-associated protein RdgC | |||