Escherichia coli IR53017 |
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Putative Escherichia coli IR53017 RM systems
Ref: Wang,L. unpublished
REBASE ref # 29098
| Sequence length: | GenBank #: | |
| Chromosome: | 5,284,197 bp | CP064103 |
| plasmid unnamed1: | 145,347 bp | CP064104 |
| plasmid unnamed2: | 47,492 bp | CP064105 |
| plasmid unnamed4: | 86,173 bp | CP064107 |
REBASE acronym: Eco3017
Org_num: 46300
All begin ISU84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4635 | transposase | |||
| 4640 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco3017ORF4645P |
| 4645 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco3017ORF4645P |
| 4650 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco3017ORF4645P |
| 4655 | AAA family ATPase | |||
| 10595 | IS3 family transposase | |||
| 10600 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco3017ORF10600P |
| 10605 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco3017ORF10600P |
| 10610 | YecA family protein | |||
| 10615 | cold shock domain-containing protein | |||
| 10620 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco3017ORF10600P |
| 10625 | M48 family metallopeptidase | |||
| 21590 | adenine/cytosine-specific restriction | |||
| 21595 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco3017ORF21600P |
| 21600 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco3017ORF21600P |
| 21605 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco3017ORF21600P |
| 21610 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3017DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco3017ORF2335P |
| 2340 | DNA-binding transcriptional regulator Fis | |||
| 7100 | DUF1382 family protein | |||
| 7105 | M | M.SspPIBORF6330P (100% identity) | M.Eco3017ORF7105P | |
| 7110 | PerC family transcriptional regulator | |||
| 10335 | phosphohydrolase | |||
| 10340 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco3017DcmP |
| 10345 | V | V.Ecos142DcmP (100% identity) | V.Eco3017DcmP | |
| 10350 | drug/metabolite exporter YedA | |||
| 16145 | replication endonuclease | |||
| 16150 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco3017ORF16150P |
| 16155 | TraR/DksA family transcriptional regulator | |||
| 21350 | LexA family transcriptional regulator | |||
| 21355 | M | M.EcoC0231ORF23310P (100% identity) | GATC | M.Eco3017ORF21355P |
| 21360 | PerC family transcriptional regulator | |||
| 23440 | LexA family transcriptional regulator | |||
| 23445 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco3017ORF23445P |
| 23450 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 25945 | 73 aa hypothetical protein | |||
| 25950 | M | M.Ecowhn14ORF35P (100% identity) | M.Eco3017ORF25950P | |
| 25955 | 102 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 26465 | 92 aa hypothetical protein | |||
| 26475 | M | M.EcoZLWTORF24570P (100% identity) | M.Eco3017ORF26475P | |
| 26480 | 89 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 27290 | 73 aa hypothetical protein | |||
| 27295 | M | M.SsoST152ORF25555P (100% identity) | M.Eco3017ORF27295P | |
| 27300 | 104 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21585 | GTPase | |||
| 21590 | R | EcoC0231MrrP (100% identity) | Eco3017MrrP | |
| 21595 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16770 | NinE family protein | |||
| 16775 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco3017ORF16775P |
| 16780 | recombination protein NinB | |||