Pseudomonas toyotomiensis SM2 |
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Putative Pseudomonas toyotomiensis SM2 RM systems
Ref: Alshamsi,M.S. et al. unpublished
REBASE ref # 32295
Complete sequence: 5,235,458 bp
GenBank #: CP070505
REBASE acronym: PtoSM2
Org_num: 48821
All begin JWV26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6225 | inorganic diphosphatase | |||
| 6230 | R | PaesAG1ORF6375P (89% identity) | PtoSM2ORF6235P | |
| 6235 | M | M.PmeMAE1KORF12250P (94% identity) | M.PtoSM2ORF6235P | |
| 6240 | virulence protein RhuM/Fic/DOC family protein | |||
| 6245 | S | S.XorYN01ORF15875P (49% identity) | S.PtoSM2ORF6235P | |
| 6250 | DUF91 domain-containing protein | |||
| 11560 | M48 family metallopeptidase | |||
| 11565 | R | PstTS44ORF14910P (99% identity) | TCCANNNNNNCGT | PtoSM2ORF11600P |
| 11570 | VWA domain-containing protein | |||
| 11575 | AAA family ATPase | |||
| 11580 | PD-(D/E)XK nuclease family protein | |||
| 11585 | virulence RhuM family protein | |||
| 11590 | 410 aa hypothetical protein | |||
| 11595 | S | S.PmoB5ORF1050P (99% identity) | TCCANNNNNNCGT | S.PtoSM2ORF11600P |
| 11600 | M | M.PaeXP23ORF33520P (99% identity) | TCCANNNNNNCGT | M.PtoSM2ORF11600P |
| 11605 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9990 | 167 aa hypothetical protein | |||
| 9995 | M | M.Pto110ORF6700P (95% identity) | M.PtoSM2ORF9995P | |
| 10000 | 8-oxoguanine DNA glycosylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | Fic family protein | |||
| 50 | M | M.PaeCF12ORF8680P (98% identity) | M.PtoSM2ORF50P | |
| 55 | R | Psp17CORFAP (98% identity) | PtoSM2ORF50P | |
| 60 | type II toxin-antitoxin system | |||