Escherichia coli O157:H7 Z1812 |
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Putative Escherichia coli O157:H7 Z1812 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,513,623 bp | CP062727 |
| plasmid pZ1812-1: | 92,757 bp | CP062728 |
REBASE acronym: EcoZ1812
Org_num: 46709
All begin ILQ51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24120 | DUF262 domain-containing protein | |||
| 24125 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1812ORF24130P |
| 24130 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1812ORF24130P |
| 24135 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1812ORF24130P |
| 24140 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1812DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1812ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7665 | recombination protein NinB | |||
| 7670 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1812ORF7670P |
| 7675 | NinE family protein | |||
| 10105 | recombination protein NinB | |||
| 10110 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1812ORF10110P |
| 10115 | NinE family protein | |||
| 10910 | phosphohydrolase | |||
| 10915 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1812DcmP |
| 10920 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1812DcmP | |
| 10925 | drug/metabolite exporter YedA | |||
| 13735 | epoxyqueuosine reductase QueH | |||
| 13740 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1812ORF13740P |
| 13745 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1812ORF13740P |
| 13750 | 90 aa hypothetical protein | |||
| 13770 | TrmB family transcriptional regulator | |||
| 13775 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1812ORF13775P | |
| 13780 | DUF1737 domain-containing protein | |||
| 15445 | DUF1737 domain-containing protein | |||
| 15460 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1812ORF15460P | |
| 15465 | TrmB family transcriptional regulator | |||
| 24370 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1812ORF24370P |
| 24375 | DEAD/DEAH box helicase | |||
| 24405 | N-acetylneuraminic acid mutarotase | |||
| 24410 | R | Ecos1613ORF26795P (100% identity) | EcoZ1812ORF24410P | |
| 24415 | transposase | |||
| plasmid pZ1812-1 | ||||
| 27580 | 101 aa hypothetical protein | |||
| 27585 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1812ORF27585P | |
| 27590 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24140 | endoribonuclease SymE | |||
| 24145 | R | EcosPA8GmrSDP (55% identity) | EcoZ1812GmrDP | |
| 24150 | R | Ecos1613GmrSP (100% identity) | EcoZ1812GmrSP | |
| 24155 | DUF1127 domain-containing protein | |||