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Putative Escherichia coli O157:H7 Z1832 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
Sequence length: | GenBank #: | |
Chromosome: | 5,520,473 bp | CP062708 |
plasmid pZ1832-1: | 92,743 bp | CP062709 |
REBASE acronym: EcoZ1832
Org_num: 46718
All begin ILQ60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24175 | DUF262 domain-containing protein | |||
24180 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1832ORF24185P |
24185 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1832ORF24185P |
24190 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1832ORF24185P |
24195 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2300 | cell division protein DamX | |||
2305 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1832DamP |
2310 | ribulose-phosphate 3-epimerase | |||
2815 | DUF2556 family protein | |||
2820 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1832ORF2820P |
2825 | DNA-binding transcriptional regulator Fis | |||
7680 | recombination protein NinB | |||
7685 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1832ORF7685P |
7690 | NinE family protein | |||
10125 | recombination protein NinB | |||
10130 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1832ORF10130P |
10135 | NinE family protein | |||
10975 | epoxyqueuosine reductase QueH | |||
10980 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1832ORF10980P |
10985 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1832ORF10980P |
10990 | 90 aa hypothetical protein | |||
11010 | TrmB family transcriptional regulator | |||
11015 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1832ORF11015P | |
11020 | DUF1737 domain-containing protein | |||
11220 | phosphohydrolase | |||
11225 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1832DcmP |
11230 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1832DcmP | |
11235 | drug/metabolite exporter YedA | |||
13435 | TrmB family transcriptional regulator | |||
13440 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1832ORF13440P | |
13455 | DUF1737 domain-containing protein | |||
24425 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1832ORF24425P |
24430 | DEAD/DEAH box helicase | |||
24460 | N-acetylneuraminic acid mutarotase | |||
24465 | R | Ecos1613ORF26795P (100% identity) | EcoZ1832ORF24465P | |
24470 | transposase | |||
plasmid pZ1832-1 | ||||
27635 | 101 aa hypothetical protein | |||
27640 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1832ORF27640P | |
27645 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24195 | endoribonuclease SymE | |||
24200 | R | EcosPA8GmrSDP (55% identity) | EcoZ1832GmrDP | |
24205 | R | Ecos1613GmrSP (100% identity) | EcoZ1832GmrSP | |
24210 | DUF1127 domain-containing protein |