Escherichia coli RIVM_C014046 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RIVM_C014046 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 1,947,521 bp
GenBank #: CP068991
REBASE acronym: Eco14046
Org_num: 46756
All begin JNN75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3110 | transcription factor | |||
| 3115 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco14046ORF3115P |
| 3120 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Eco14046ORF3115P |
| 3125 | DUF4433 domain-containing protein | |||
| 3130 | macro domain-containing protein | |||
| 3135 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco14046ORF3115P |
| 3140 | M48 family metallopeptidase | |||
| 8835 | DUF262 domain-containing protein | |||
| 8840 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco14046ORF8845P |
| 8845 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco14046ORF8845P |
| 8850 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco14046ORF8845P |
| 8855 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8565 | phage holin, lambda family | |||
| 8570 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco14046ORF8570P | |
| 8575 | 67 aa hypothetical protein | |||
| 8610 | LexA family transcriptional regulator | |||
| 8615 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco14046ORF8615P |
| 8620 | PerC family transcriptional regulator | |||
| 9020 | HNH endonuclease | |||
| 9025 | R | Ecoi127aORF4076P (100% identity) | Eco14046ORF9025P | |
| 9030 | 59 aa hypothetical protein | |||
| 9320 | conjugal transfer protein TraG N-terminal | |||
| 9325 | M | M.EcosS3ORF15775P (100% identity) | M.Eco14046ORF9325P | |
| 9330 | R | EcosS3ORF15775P (100% identity) | Eco14046ORF9325P | |
| 9335 | 527 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8855 | endoribonuclease SymE | |||
| 8860 | R | EcoRb3GmrSDP (100% identity) | Eco14046GmrSDP | |
| 8865 | 26 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1705 | NinE family protein | |||
| 1710 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco14046ORF1710P |
| 1715 | recombination protein NinB | |||